DRSC/TRiP Functional Genomics Resources

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Protein Alignment Toll-6 and pan-1

DIOPT Version :9

Sequence 1:NP_001246765.1 Gene:Toll-6 / 39663 FlyBaseID:FBgn0036494 Length:1514 Species:Drosophila melanogaster
Sequence 2:NP_497925.1 Gene:pan-1 / 175596 WormBaseID:WBGene00003915 Length:594 Species:Caenorhabditis elegans


Alignment Length:522 Identity:132/522 - (25%)
Similarity:230/522 - (44%) Gaps:90/522 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   265 AKKSSSSSTSCSLDL-----EYLDVSHNDFVVLPANG-FGTLRRLRVLSVNNNGISMIADKALSG 323
            |:.:.|..|...:|:     |..:.......:...|| |.|::.. .:...:..|:.:::. |:.
 Worm    13 ARIAISEETKSCIDIEKGFKEEFNAHKQPVCICADNGIFSTVKGF-TIECESASIASVSEN-LAS 75

  Fly   324 LKNLQI--LNLSSNKIVALPTELFAEQAKIIQEVYLQNNSISVLNPQLFSNLDQLQALDLSMNQI 386
            |...::  |.:..:.:..||.:||  :....::|.|:...:|.|.|..|      |:|..|..  
 Worm    76 LNGTELGRLTIRDSTVNVLPQDLF--ENVFAKQVKLERCGLSTLQPNSF------QSLGGSAE-- 130

  Fly   387 TSTWIDKNTFVGLIRLVLLNLSHNKLTKLEPEIFSDLYTLQILNLRHNQLENIAADTFAPMNNLH 451
                             ||:|..|::.|||..:|:.|.:|:.|:|..|:::.|....|..:..:.
 Worm   131 -----------------LLSLRENRIKKLEKGLFTGLKSLKTLDLAMNKIQEIDVGAFEELKKVE 178

  Fly   452 TLLLSHNKLKYLDAYALNGLYVLSLLSLDNNALIGVHPDAFRNCSALQDLNLNGNQLK----TVP 512
            .|||:.|.::.|.....:|:..|..|:|.|..|..:...|||..::|:.|.|:.|.|:    |:.
 Worm   179 ELLLNENDIRVLKTGTFDGMKNLKKLTLQNCNLEIIQKGAFRGLNSLEQLILSNNNLENIDWTIF 243

  Fly   513 LALRNMRHLRTVDLGENMITVMEDSAFKGLGNLYGLRLIGNYLENITMHTFRDLPNLQILNLARN 577
            .||:|   ||.:|||.|.|:.:|..:|..|..|.   |..|.::::.....:|||:|.:....||
 Worm   244 SALKN---LRVLDLGSNKISNVEMKSFPKLEKLV---LNNNTIDSMKSIKLKDLPSLVVALFDRN 302

  Fly   578 RI-AVVEPGAFEMTSS--IQAVRLDGNELNDIN-GLFSNMPSLLWLNISDNRLESFDYGHVPSTL 638
            :| ::.:...|.:|.|  |:.:.|..|.|:.|: ..|.:.|:|:.|.:..|::|... .|.||  
 Worm   303 KIESIGDMDMFGLTRSDRIETLSLARNNLSQISPKAFQHTPNLITLLLQYNQIEELS-SHSPS-- 364

  Fly   639 QWLDLHKNRLSSLSNRFGLDSELKLQTLDVSFNQLQRIGPSSIPNSIELLFLNDNLITTVDPDT- 702
               .:....|:||.         ||.||.:|.|.|..|....:|.|:..|.|:.|:|:.::... 
 Worm   365 ---QVRTPFLASLK---------KLVTLQLSSNNLSVIRSDELPKSLSSLALDHNVISKIEARAL 417

  Fly   703 --------FMHKTNLTRVDLYANQITTLDIKSLRILPVWEHRALPEFYIGGNPFTCDCN--IDWL 757
                    ::|...|..  ||.....:...||:..:.|           ..||:.|.||  .:||
 Worm   418 EGMEIKRLYLHSNKLNY--LYQGTFDSFSPKSVEAVDV-----------SLNPWVCVCNDPKEWL 469

  Fly   758 QK 759
            .:
 Worm   470 PR 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Toll-6NP_001246765.1 leucine-rich repeat 148..171 CDD:275380
LRR_8 171..236 CDD:290566
leucine-rich repeat 172..201 CDD:275380
leucine-rich repeat 202..278 CDD:275380 3/12 (25%)
leucine-rich repeat 229..249 CDD:275380
LRR_RI 278..468 CDD:238064 43/197 (22%)
leucine-rich repeat 279..302 CDD:275380 5/28 (18%)
LRR_8 301..386 CDD:290566 17/86 (20%)
leucine-rich repeat 303..326 CDD:275380 3/22 (14%)
leucine-rich repeat 327..350 CDD:275380 5/24 (21%)
LRR 350..729 CDD:227223 107/395 (27%)
leucine-rich repeat 352..375 CDD:275380 6/22 (27%)
leucine-rich repeat 376..401 CDD:275380 3/24 (13%)
LRR_RI <401..626 CDD:238064 71/232 (31%)
leucine-rich repeat 402..425 CDD:275380 9/22 (41%)
leucine-rich repeat 426..449 CDD:275380 6/22 (27%)
leucine-rich repeat 450..473 CDD:275380 6/22 (27%)
leucine-rich repeat 474..497 CDD:275380 8/22 (36%)
leucine-rich repeat 498..518 CDD:275380 8/23 (35%)
leucine-rich repeat 521..544 CDD:275380 10/22 (45%)
leucine-rich repeat 545..566 CDD:275380 3/20 (15%)
leucine-rich repeat 569..592 CDD:275380 6/23 (26%)
leucine-rich repeat 593..615 CDD:275380 6/22 (27%)
leucine-rich repeat 616..637 CDD:275380 6/20 (30%)
leucine-rich repeat 638..662 CDD:275380 3/23 (13%)
leucine-rich repeat 663..684 CDD:275380 8/20 (40%)
leucine-rich repeat 685..708 CDD:275380 5/31 (16%)
leucine-rich repeat 709..728 CDD:275380 5/18 (28%)
LRR_8 883..943 CDD:290566
leucine-rich repeat 885..908 CDD:275380
leucine-rich repeat 909..932 CDD:275380
LRR_8 932..990 CDD:290566
leucine-rich repeat 933..956 CDD:275380
TIR 1114..1247 CDD:214587
pan-1NP_497925.1 leucine-rich repeat 130..152 CDD:275380 9/40 (23%)
LRR_8 132..187 CDD:290566 18/54 (33%)
leucine-rich repeat 153..176 CDD:275380 6/22 (27%)
leucine-rich repeat 177..200 CDD:275380 6/22 (27%)
LRR_8 199..259 CDD:290566 23/62 (37%)
leucine-rich repeat 201..224 CDD:275380 8/22 (36%)
LRR_RI 224..434 CDD:238064 65/230 (28%)
leucine-rich repeat 225..248 CDD:275380 8/22 (36%)
leucine-rich repeat 249..269 CDD:275380 9/19 (47%)
LRR_8 268..355 CDD:290566 24/89 (27%)
leucine-rich repeat 270..293 CDD:275380 6/25 (24%)
leucine-rich repeat 294..320 CDD:275380 7/25 (28%)
LRR_8 320..387 CDD:290566 23/81 (28%)
leucine-rich repeat 321..344 CDD:275380 6/22 (27%)
LRR_8 375..432 CDD:290566 15/65 (23%)
leucine-rich repeat 377..398 CDD:275380 8/20 (40%)
leucine-rich repeat 399..420 CDD:275380 4/20 (20%)
leucine-rich repeat 423..442 CDD:275380 4/20 (20%)
LRR_RI 80..326 CDD:238064 76/278 (27%)
leucine-rich repeat 81..104 CDD:275380 5/24 (21%)
leucine-rich repeat 105..128 CDD:275380 8/28 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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