DRSC/TRiP Functional Genomics Resources

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Protein Alignment Toll-6 and Lrrn3

DIOPT Version :9

Sequence 1:NP_001246765.1 Gene:Toll-6 / 39663 FlyBaseID:FBgn0036494 Length:1514 Species:Drosophila melanogaster
Sequence 2:NP_001258637.1 Gene:Lrrn3 / 16981 MGIID:106036 Length:707 Species:Mus musculus


Alignment Length:766 Identity:142/766 - (18%)
Similarity:285/766 - (37%) Gaps:224/766 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   172 LRNLTLRTHNILWPALNFEIEADAFSVTRRLERLDLSSNNI--WSLPDNIFCTLSELSALNMSEN 234
            :::..|:.|.:|..|:...::|    :.::::...|.:..|  |..|.:|:...|.:        
Mouse     1 MKDTPLQVHVLLGLAITTLVQA----IDKKVDCPQLCTCEIRPWFTPRSIYMEASTV-------- 53

  Fly   235 RLQDVNELGFRD-RSKEPTNGSTESTSTTESAKKSSSSSTSCSLDLEYLDVSHNDFVVLPANGFG 298
               |.|:||..: .::.|.:.......|...|:  ...||...::|..||:|.|:...:......
Mouse    54 ---DCNDLGLLNFPARLPADTQILLLQTNNIAR--IEHSTDFPVNLTGLDLSQNNLSSVTNINVQ 113

  Fly   299 TLRRLRVLSVNNNGISMIADKALSGLKNLQILNLSSNKIVALPTELFAEQAKIIQEVYLQNNSIS 363
            .:.:|..:.:..|.::.:.:|.|.||.||                         ||:|:.:|.:|
Mouse   114 KMSQLLSVYLEENKLTELPEKCLYGLSNL-------------------------QELYVNHNLLS 153

  Fly   364 VLNPQLFSNLDQLQALDLSMNQITSTWIDKNTFVGLIRLVLLNLSHNKLTKLEPEIFSDLYTLQI 428
            .::|                          ..|:||..|:.|:|:.|:|..:..:.|..|..|:|
Mouse   154 TISP--------------------------GAFIGLHNLLRLHLNSNRLQMINSQWFDALPNLEI 192

  Fly   429 LNLRHNQLENIAADTFAPMNNLHTLLLSHNKLKYLDAYALNGLYVLSLLSLDNNALIGVHPDAFR 493
            |.|..|.:..|....|.|:..|.:|:::.                ::|..:.::||.|:      
Mouse   193 LMLGDNPIIRIKDMNFQPLVKLRSLVIAG----------------INLTEIPDDALAGL------ 235

  Fly   494 NCSALQDLNLNGNQLKTVP-LALRNMRHLRTVDLGENMITVMEDSAFKGLGNLYGLRLIGNYLEN 557
              ..|:.::...|:|..|| :||:...:|:.:||.:|.|..:....|..:.:|..|. |.|..|.
Mouse   236 --ENLESISFYDNRLSKVPQVALQKAVNLKFLDLNKNPINRIRRGDFSNMLHLKELG-INNMPEL 297

  Fly   558 ITMHTFR--DLPNLQILNLARN-RIAVVEPGAFEMTSSIQAVRLDGNELNDI-NGLFSNMPSLLW 618
            :::.:..  :||:|:.:....| |::.:.|.||.....::::.|:.|.|:.: :|...::|:|..
Mouse   298 VSIDSLAVDNLPDLRKIEATNNPRLSYIHPNAFFRLPKLESLMLNTNALSALYHGTIESLPNLKE 362

  Fly   619 LNISDNRLESFDYGHVPSTLQWLDLHKN--RLSSLSNRFGLD-SELKLQTL-DVSFNQLQR---- 675
            ::|..|.:      .....::|::::|.  |.....:.|.:| .|.:.|.: .|.|..:..    
Mouse   363 ISIHSNPI------RCDCVIRWINMNKTNIRFMEPDSLFCVDPPEFQGQNVRQVHFRDMMEICLP 421

  Fly   676 -IGPSSIPNSIEL---LFLNDNLITTVDPDT---------------------FMHK--------- 706
             |.|.|.|:.:::   .:::.:...|.:|..                     ::|.         
Mouse   422 LIAPESFPSDLDVEADSYVSLHCRATAEPQPEIYWITPSGKKLLPNTMREKFYVHSEGTLEIRGI 486

  Fly   707 ------------TNLTRVDLYANQITT----------------LDIKSLRILPVWEHRALPEFYI 743
                        |||...||.:..|..                .||::..:|..|  :|..:...
Mouse   487 TPKEGGLYTCIATNLVGADLKSIMIKVGGSVPQDNNGSLNIKIRDIRANSVLVSW--KASSKILK 549

  Fly   744 GGNPFTC-----------DCNIDWLQKINHIT----SRQYPRIMDLETIYCKLLNNRERAYIPLI 793
            ....:|.           ...|.:..|:.::|    |.:|...:|:.|:|.|............:
Mouse   550 SSVKWTAFVKTEDSHAAQSARIPFDVKVYNLTHLKPSTEYKICIDIPTVYQKSRKQCVNVTTKSL 614

  Fly   794 EAEPKHF--------------------LCTYK----------THCFAVCHC 814
            |.:.|.:                    :|.:.          .|.:||.||
Mouse   615 EHDGKEYGKNHTVFVACVGGLLGIIGVMCLFSCVSQEGSSEGEHSYAVNHC 665

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Toll-6NP_001246765.1 leucine-rich repeat 148..171 CDD:275380
LRR_8 171..236 CDD:290566 11/65 (17%)
leucine-rich repeat 172..201 CDD:275380 5/28 (18%)
leucine-rich repeat 202..278 CDD:275380 15/78 (19%)
leucine-rich repeat 229..249 CDD:275380 4/20 (20%)
LRR_RI 278..468 CDD:238064 39/189 (21%)
leucine-rich repeat 279..302 CDD:275380 5/22 (23%)
LRR_8 301..386 CDD:290566 14/84 (17%)
leucine-rich repeat 303..326 CDD:275380 6/22 (27%)
leucine-rich repeat 327..350 CDD:275380 1/22 (5%)
LRR 350..729 CDD:227223 88/453 (19%)
leucine-rich repeat 352..375 CDD:275380 6/22 (27%)
leucine-rich repeat 376..401 CDD:275380 3/24 (13%)
LRR_RI <401..626 CDD:238064 55/229 (24%)
leucine-rich repeat 402..425 CDD:275380 7/22 (32%)
leucine-rich repeat 426..449 CDD:275380 8/22 (36%)
leucine-rich repeat 450..473 CDD:275380 2/22 (9%)
leucine-rich repeat 474..497 CDD:275380 4/22 (18%)
leucine-rich repeat 498..518 CDD:275380 7/20 (35%)
leucine-rich repeat 521..544 CDD:275380 6/22 (27%)
leucine-rich repeat 545..566 CDD:275380 5/22 (23%)
leucine-rich repeat 569..592 CDD:275380 6/23 (26%)
leucine-rich repeat 593..615 CDD:275380 4/22 (18%)
leucine-rich repeat 616..637 CDD:275380 3/20 (15%)
leucine-rich repeat 638..662 CDD:275380 6/26 (23%)
leucine-rich repeat 663..684 CDD:275380 7/26 (27%)
leucine-rich repeat 685..708 CDD:275380 3/67 (4%)
leucine-rich repeat 709..728 CDD:275380 6/34 (18%)
LRR_8 883..943 CDD:290566
leucine-rich repeat 885..908 CDD:275380
leucine-rich repeat 909..932 CDD:275380
LRR_8 932..990 CDD:290566
leucine-rich repeat 933..956 CDD:275380
TIR 1114..1247 CDD:214587
Lrrn3NP_001258637.1 LRRNT 28..72 CDD:214470 11/54 (20%)
LRR 1 70..91 4/22 (18%)
leucine-rich repeat 72..93 CDD:275380 4/22 (18%)
LRR_8 93..152 CDD:290566 17/83 (20%)
LRR 2 93..114 5/20 (25%)
leucine-rich repeat 94..117 CDD:275380 5/22 (23%)
LRR 3 117..138 4/20 (20%)
leucine-rich repeat 118..141 CDD:275380 6/22 (27%)
LRR 139..160 CDD:197688 9/71 (13%)
LRR 4 141..162 9/71 (13%)
leucine-rich repeat 142..165 CDD:275380 10/73 (14%)
LRR 5 165..186 6/20 (30%)
leucine-rich repeat 166..189 CDD:275380 7/22 (32%)
LRR_8 173..221 CDD:290566 14/47 (30%)
LRR 6 189..210 7/20 (35%)
leucine-rich repeat 190..213 CDD:275380 8/22 (36%)
LRR_8 213..272 CDD:290566 17/82 (21%)
LRR 7 213..234 5/36 (14%)
leucine-rich repeat 214..237 CDD:275380 6/46 (13%)
LRR 8 237..258 7/20 (35%)
leucine-rich repeat 238..261 CDD:275380 7/22 (32%)
LRR 9 261..282 6/20 (30%)
leucine-rich repeat 262..285 CDD:275380 6/22 (27%)
LRR 10 285..304 5/19 (26%)
leucine-rich repeat 286..310 CDD:275380 6/24 (25%)
LRR 11 310..332 6/21 (29%)
LRR_8 311..370 CDD:290566 14/58 (24%)
leucine-rich repeat 311..333 CDD:275380 6/21 (29%)
LRR 12 335..358 4/22 (18%)
leucine-rich repeat 336..359 CDD:275380 4/22 (18%)
LRRCT 368..419 CDD:214507 10/56 (18%)
I-set 429..513 CDD:254352 10/83 (12%)
Ig 440..513 CDD:299845 9/72 (13%)
fn3 526..593 CDD:278470 11/68 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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