DRSC/TRiP Functional Genomics Resources

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Protein Alignment Toll-6 and lrrtm1

DIOPT Version :9

Sequence 1:NP_001246765.1 Gene:Toll-6 / 39663 FlyBaseID:FBgn0036494 Length:1514 Species:Drosophila melanogaster
Sequence 2:XP_002935525.1 Gene:lrrtm1 / 100493874 XenbaseID:XB-GENE-966481 Length:521 Species:Xenopus tropicalis


Alignment Length:456 Identity:112/456 - (24%)
Similarity:199/456 - (43%) Gaps:103/456 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   209 SNNIWSLPDNIFCTLSELSALNMSENRLQDVNELGFRDRSKEPTNGSTESTSTTESAKKSSSSST 273
            |.|:..:|.|    ||.:..|::..|.|.::.:..|                             
 Frog    54 SQNVTEIPHN----LSGVMGLSLRYNSLSELQDGQF----------------------------- 85

  Fly   274 SCSLDLEYLDVSHNDFVVLPANGFGTLRRLRVLSVNNNGISMIADKALSGLKNLQILNLSSNKIV 338
            :..:.|.:|.:.||....:..|.|..|||::.|::::|.|:.:|:.....:.||:.::||:|.:.
 Frog    86 TGLIQLTWLYLDHNHIHTVEGNAFHKLRRVKELTLSSNKITHLANTTFRPMPNLRSVDLSNNNLQ 150

  Fly   339 ALPTELFAEQAKIIQEVYLQNNSISVLNPQLFSNLDQLQALDLSMNQITSTWIDKNTFVGLIRLV 403
            :|..:||....| :..::::.|:|..:..::|.:...|:.|||..||:.|  :.:|:|.||.:|.
 Frog   151 SLEADLFHGLRK-LTTLHMRYNAIKFVPVRIFQDCRSLKFLDLGYNQLKS--LARNSFAGLFKLT 212

  Fly   404 LLNLSHNKLTKLEPEIFSDLYTLQILNLRHNQLENIAADTFAPMNNLHTLLLSHNKLKYLDAYAL 468
            .|:|.||.|.|:....|..|.:|..|.:|.|:: .|..::...:..|..:.||.|:::|::.:..
 Frog   213 ELHLEHNDLVKVNLAHFPRLLSLHSLFMRRNKV-TIVVNSLDFVWKLEKMDLSGNEIEYIEPHVF 276

  Fly   469 NGLYVLSLLSLDNNALIGVHPDAFRNCSALQDLNLNGNQLKTVPLALRNMRHLRTVDLGENMITV 533
            ..|..|..|.||:|.|..|.|....:..:|..:.|.||..                |.|.|:..:
 Frog   277 ESLPHLESLQLDSNRLTYVDPRILNSWKSLSSITLAGNNW----------------DCGRNVCAL 325

  Fly   534 ME-DSAFKGLGNLYGLRLIGNYL---------ENI--TMHTFR------DLPNLQILNLARN--- 577
            .. .|||||       |..||.|         |::  .::.||      |..:...::.|.|   
 Frog   326 ASWLSAFKG-------RCDGNMLCTTPEYAQGEDVLDAVYFFRLCDDPVDPTSANAISTALNNSD 383

  Fly   578 RIAVVEPGAF---------EMTSSIQAVRLDGNELND--------ING----LFSNMPSLLWLNI 621
            |||:..|.|.         |.|:::|...: .||.::        :.|    :||.:..:|.|.:
 Frog   384 RIAIDSPTATSYNVQDTEGERTTNVQTATV-ANEHHENTVQIHKVVTGTMALIFSFLIVVLMLYV 447

  Fly   622 S 622
            |
 Frog   448 S 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Toll-6NP_001246765.1 leucine-rich repeat 148..171 CDD:275380
LRR_8 171..236 CDD:290566 8/26 (31%)
leucine-rich repeat 172..201 CDD:275380
leucine-rich repeat 202..278 CDD:275380 10/68 (15%)
leucine-rich repeat 229..249 CDD:275380 4/19 (21%)
LRR_RI 278..468 CDD:238064 55/189 (29%)
leucine-rich repeat 279..302 CDD:275380 7/22 (32%)
LRR_8 301..386 CDD:290566 23/84 (27%)
leucine-rich repeat 303..326 CDD:275380 4/22 (18%)
leucine-rich repeat 327..350 CDD:275380 7/22 (32%)
LRR 350..729 CDD:227223 81/315 (26%)
leucine-rich repeat 352..375 CDD:275380 3/22 (14%)
leucine-rich repeat 376..401 CDD:275380 11/24 (46%)
LRR_RI <401..626 CDD:238064 66/264 (25%)
leucine-rich repeat 402..425 CDD:275380 9/22 (41%)
leucine-rich repeat 426..449 CDD:275380 5/22 (23%)
leucine-rich repeat 450..473 CDD:275380 6/22 (27%)
leucine-rich repeat 474..497 CDD:275380 8/22 (36%)
leucine-rich repeat 498..518 CDD:275380 4/19 (21%)
leucine-rich repeat 521..544 CDD:275380 8/23 (35%)
leucine-rich repeat 545..566 CDD:275380 7/37 (19%)
leucine-rich repeat 569..592 CDD:275380 9/34 (26%)
leucine-rich repeat 593..615 CDD:275380 6/33 (18%)
leucine-rich repeat 616..637 CDD:275380 3/7 (43%)
leucine-rich repeat 638..662 CDD:275380
leucine-rich repeat 663..684 CDD:275380
leucine-rich repeat 685..708 CDD:275380
leucine-rich repeat 709..728 CDD:275380
LRR_8 883..943 CDD:290566
leucine-rich repeat 885..908 CDD:275380
leucine-rich repeat 909..932 CDD:275380
LRR_8 932..990 CDD:290566
leucine-rich repeat 933..956 CDD:275380
TIR 1114..1247 CDD:214587
lrrtm1XP_002935525.1 LRRNT 38..>61 CDD:214470 2/6 (33%)
LRR 53..>316 CDD:227223 78/298 (26%)
leucine-rich repeat 70..90 CDD:275380 4/48 (8%)
leucine-rich repeat 91..114 CDD:275380 7/22 (32%)
LRR_8 114..173 CDD:338972 15/59 (25%)
leucine-rich repeat 115..138 CDD:275380 4/22 (18%)
leucine-rich repeat 139..162 CDD:275380 7/22 (32%)
leucine-rich repeat 163..186 CDD:275380 3/22 (14%)
leucine-rich repeat 187..210 CDD:275380 11/24 (46%)
leucine-rich repeat 211..234 CDD:275380 9/22 (41%)
leucine-rich repeat 235..257 CDD:275380 5/22 (23%)
leucine-rich repeat 258..281 CDD:275380 6/22 (27%)
leucine-rich repeat 282..300 CDD:275380 8/17 (47%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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