DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Toll-6 and lrfn2

DIOPT Version :9

Sequence 1:NP_001246765.1 Gene:Toll-6 / 39663 FlyBaseID:FBgn0036494 Length:1514 Species:Drosophila melanogaster
Sequence 2:XP_031758515.1 Gene:lrfn2 / 100491687 XenbaseID:XB-GENE-6035533 Length:765 Species:Xenopus tropicalis


Alignment Length:711 Identity:159/711 - (22%)
Similarity:268/711 - (37%) Gaps:183/711 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   330 LNLSSNKIVALPTELFAEQAKIIQEVYLQNNSISVLNPQLFSNLDQLQALDLSMNQITSTWIDKN 394
            |.|..|.|:::..:.||....:: ::.|..|:||.:.|..|.:|:.|::|.|..|::|:  :..:
 Frog    56 LRLGGNFIISINRQDFANMTGLV-DLTLSRNTISYIQPYSFIDLESLRSLHLDSNRLTN--LGDD 117

  Fly   395 TFVGLIRLVLLNLSHNKLTKLEPEIFSD-LYTLQILNLRHNQLENIAADTFAPMNNLHTLLLSHN 458
            .|.|||.|..|.:::|:|..:..:.|.| |.||:.|:|.:|.|:.:..|....|.|||.|.|.||
 Frog   118 VFRGLINLQHLIMNNNQLNSIAEDAFEDLLQTLEDLDLSYNNLKTVPWDAVRRMVNLHQLSLDHN 182

  Fly   459 KLKYLDAYALNGLYVLSLLSLDNNALIGVHPDAFRNCSALQDLNLNGNQLKTVPLALR---NMRH 520
            .:.|:.......|..|:.|.|.:|.|..:.||..   .|...:::......:.||:|.   |..|
 Frog   183 LIYYITEGTFQDLNKLARLDLTSNRLQKLPPDPI---FARSQISMTSATPFSPPLSLSFGGNPLH 244

  Fly   521 -------LRTVDLGENMITVMEDSAFKGLGNLYGLRLIGNYLENITMHTFRDLPNLQILNLARNR 578
                   ||.:|..::|.|....||.|           |.|...:....|...|.|  :.....|
 Frog   245 CNCELLWLRRLDREDDMETCASPSALK-----------GRYFWYVREEEFVCEPPL--ITQYTQR 296

  Fly   579 IAVVEPGAFEMTSSIQAVRLDGNELNDINGLFSNMPSLLWLNISDNRLESFDYGHVPSTLQW--- 640
            :.|:|    ..|:|::. :..|:.|          |.:.|: ..|.||    .|:...|..:   
 Frog   297 LLVLE----GQTASLKC-KAVGDPL----------PVIHWV-APDGRL----IGNSSRTTVYDNG 341

  Fly   641 -LDLHKNRLSSLSNRFGLDSELKLQT-------LDVSFNQLQRI----GPSSIPNSIELLFLNDN 693
             ||:    |.:.|..:|..:.:....       :::|..|:..:    |.::.|.|    .|:|.
 Frog   342 TLDI----LITTSKDYGTFTCIAANAAGELTAPVELSIVQIPHVSNGTGRTAPPKS----RLSDI 398

  Fly   694 LITTVDPDTFMHKTNLTRVDLYANQITTLDIKSLRILPVWEHRALPEFYIGGNPFTCDCNIDWLQ 758
            ..:|        |:|       ..::.|...|::.:..|....||               :.|  
 Frog   399 TSST--------KSN-------RGEVKTAPEKAVVVSEVTSSTAL---------------VKW-- 431

  Fly   759 KINHITSRQYPRIMDLETIY-CKLLNNRERAYIPLIEAEPKHFLCTYKTHCFAVCHCCEFDACDC 822
                ..|:..|::...:..| |   ::.|.....:|.|..|.|:........|      :|.|..
 Frog   432 ----SVSKAAPKVKMYQLQYNC---SDDEVLIYRMIPASNKAFVVNNLVSGTA------YDLCVL 483

  Fly   823 EMTCPTNCTCFHDQTWSTNIVECSGAAYSEMPRRVPMDTSELYIDGNNFVELAGHS-FLGRKNLA 886
            .:...|..|     ..:||||.|:           ...|.|.|....:.     || |||...:.
 Frog   484 AIWDDTATT-----LTATNIVGCA-----------QFFTQEDYQQCQSM-----HSQFLGGTMIL 527

  Fly   887 VLYANNSNVAHIYNTTFSGLKRLLILHLEDNHIISLEGNEFHNLENLRELYLQSNKIASIANGSF 951
            |:      ...|..|....:..|::.:...||   .:|    .:.|:..:|.|:|...::.||:.
 Frog   528 VI------GGIIVATLLVFIVILMVRYKICNH---SQG----KMANVTNVYSQTNGGNTVQNGAP 579

  Fly   952 QMLRKLEVLRLDGNRLMHFEV---------------------WQLSANPYLVEISLADNQW 991
            .......|:|   |.||.|:.                     :.|.:||     |...|:|
 Frog   580 PQTNPKVVVR---NELMEFQCGSAHSSVSSSSSSVNSPDGDDYSLHSNP-----STLSNKW 632

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Toll-6NP_001246765.1 leucine-rich repeat 148..171 CDD:275380
LRR_8 171..236 CDD:290566
leucine-rich repeat 172..201 CDD:275380
leucine-rich repeat 202..278 CDD:275380
leucine-rich repeat 229..249 CDD:275380
LRR_RI 278..468 CDD:238064 45/138 (33%)
leucine-rich repeat 279..302 CDD:275380
LRR_8 301..386 CDD:290566 17/55 (31%)
leucine-rich repeat 303..326 CDD:275380
leucine-rich repeat 327..350 CDD:275380 6/19 (32%)
LRR 350..729 CDD:227223 97/404 (24%)
leucine-rich repeat 352..375 CDD:275380 7/22 (32%)
leucine-rich repeat 376..401 CDD:275380 8/24 (33%)
LRR_RI <401..626 CDD:238064 60/235 (26%)
leucine-rich repeat 402..425 CDD:275380 7/23 (30%)
leucine-rich repeat 426..449 CDD:275380 7/22 (32%)
leucine-rich repeat 450..473 CDD:275380 8/22 (36%)
leucine-rich repeat 474..497 CDD:275380 7/22 (32%)
leucine-rich repeat 498..518 CDD:275380 3/22 (14%)
leucine-rich repeat 521..544 CDD:275380 8/22 (36%)
leucine-rich repeat 545..566 CDD:275380 3/20 (15%)
leucine-rich repeat 569..592 CDD:275380 5/22 (23%)
leucine-rich repeat 593..615 CDD:275380 2/21 (10%)
leucine-rich repeat 616..637 CDD:275380 5/20 (25%)
leucine-rich repeat 638..662 CDD:275380 5/27 (19%)
leucine-rich repeat 663..684 CDD:275380 4/31 (13%)
leucine-rich repeat 685..708 CDD:275380 4/22 (18%)
leucine-rich repeat 709..728 CDD:275380 2/18 (11%)
LRR_8 883..943 CDD:290566 11/59 (19%)
leucine-rich repeat 885..908 CDD:275380 3/22 (14%)
leucine-rich repeat 909..932 CDD:275380 4/22 (18%)
LRR_8 932..990 CDD:290566 16/78 (21%)
leucine-rich repeat 933..956 CDD:275380 5/22 (23%)
TIR 1114..1247 CDD:214587
lrfn2XP_031758515.1 LRR_8 51..111 CDD:404697 17/55 (31%)
leucine-rich repeat 53..76 CDD:275380 6/19 (32%)
leucine-rich repeat 77..100 CDD:275380 7/23 (30%)
LRR_8 100..160 CDD:404697 21/61 (34%)
leucine-rich repeat 101..124 CDD:275380 8/24 (33%)
leucine-rich repeat 125..148 CDD:275380 6/22 (27%)
LRR_8 148..208 CDD:404697 21/59 (36%)
leucine-rich repeat 150..173 CDD:275380 7/22 (32%)
leucine-rich repeat 174..197 CDD:275380 8/22 (36%)
LRRCT 241..285 CDD:214507 13/54 (24%)
Ig 288..375 CDD:416386 20/112 (18%)
Ig strand A 288..291 CDD:409353 1/4 (25%)
Ig strand A' 295..298 CDD:409353 1/2 (50%)
Ig strand B 304..312 CDD:409353 2/8 (25%)
Ig strand C 318..323 CDD:409353 1/5 (20%)
Ig strand C' 326..328 CDD:409353 0/1 (0%)
Ig strand D 334..338 CDD:409353 1/3 (33%)
Ig strand E 341..345 CDD:409353 1/3 (33%)
Ig strand F 355..362 CDD:409353 0/6 (0%)
Ig strand G 365..375 CDD:409353 0/9 (0%)
fn3 417..485 CDD:394996 16/97 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.