DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7255 and gabP

DIOPT Version :10

Sequence 1:NP_001034016.1 Gene:CG7255 / 39662 FlyBaseID:FBgn0036493 Length:1063 Species:Drosophila melanogaster
Sequence 2:NP_417149.1 Gene:gabP / 948049 ECOCYCID:EG11330 Length:466 Species:Escherichia coli


Alignment Length:405 Identity:103/405 - (25%)
Similarity:179/405 - (44%) Gaps:60/405 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 LTALGVGSTLGAGVYVLAGQIAKDQAGPSVMISFAIAALASLLAGVCYAEFGARVPKAGSAYVYS 101
            :|.|.:...:||.::| ...:|..:|||:|::::..|.|..::.....||.....|..||...|:
E. coli    19 VTMLSIAGVIGASLFV-GSSVAIAEAGPAVLLAYLFAGLLVVMIMRMLAEMAVATPDTGSFSTYA 82

  Fly   102 YVCIGEFVAFVIG------WNLILEYVIGTASV-----CRGISLYLDSLLNDTLKYTFAEVAPMN 155
            ...||.:..:.||      |.|::......|::     ..||.::|.||: .||..|.:.:  ::
E. coli    83 DKAIGRWAGYTIGWLYWWFWVLVIPLEANIAAMILHSWVPGIPIWLFSLV-ITLALTGSNL--LS 144

  Fly   156 VSFLGSYFDFLAFGLVVVFGVALAFGVETSTMANNFVTCLNIFILGFVIIAGALKADYSNWTVDP 220
            |...|.:..:||...|:..   |||                || ||.|.|:|..  .|:.     
E. coli   145 VKNYGEFEFWLALCKVIAI---LAF----------------IF-LGAVAISGFY--PYAE----- 182

  Fly   221 STVSANSTI-GSGGFFPFGFEGTLRGAATCFFGFVGFDCIATTGEEVRNPRKNIPK---SILLSL 281
              ||..|.: .||||.|.||...|.......|.|:|.:.:.....|...|.|:|.:   |::..:
E. coli   183 --VSGISRLWDSGGFMPNGFGAVLSAMLITMFSFMGAEIVTIAAAESDTPEKHIVRATNSVIWRI 245

  Fly   282 LIIFLCYFGVSTVLTLMLPYYIQDVNAPLPY--AFEYVGWPVAMWIVTVGGLVGLLASLFGALFP 344
            .|.:||..   .|:..::|:.:..:.|...|  ..|.:..|.|..|:....|:.:.:.|..||:.
E. coli   246 SIFYLCSI---FVVVALIPWNMPGLKAVGSYRSVLELLNIPHAKLIMDCVILLSVTSCLNSALYT 307

  Fly   345 LPRVMYSMAQDGLLFKFLGKVSPRFRVPVTGSIVA--ALFTAAIAGLFDLSQLVSLL--SIG--T 403
            ..|::||:::.|.....:||:: |.:.|....:::  |.|...:...:..:::...|  |.|  .
E. coli   308 ASRMLYSLSRRGDAPAVMGKIN-RSKTPYVAVLLSTGAAFLTVVVNYYAPAKVFKFLIDSSGAIA 371

  Fly   404 LLAYSVVAISIMLLR 418
            ||.|.|:|:|.:.:|
E. coli   372 LLVYLVIAVSQLRMR 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7255NP_001034016.1 2A0303 9..581 CDD:273330 103/405 (25%)
gabPNP_417149.1 PRK10197 21..466 CDD:182297 102/403 (25%)

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