DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7255 and sbm

DIOPT Version :9

Sequence 1:NP_001034016.1 Gene:CG7255 / 39662 FlyBaseID:FBgn0036493 Length:1063 Species:Drosophila melanogaster
Sequence 2:NP_727785.1 Gene:sbm / 32397 FlyBaseID:FBgn0030574 Length:541 Species:Drosophila melanogaster


Alignment Length:571 Identity:121/571 - (21%)
Similarity:218/571 - (38%) Gaps:127/571 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 RKNLQADGSEGE--TKLNRVLGLWDLTALGVGSTLGAGVYVL-AGQIAKDQAGPSVMISFAI--- 72
            ||.|:.:||...  ..|.|.|||:...||.||:.:|:|::|. :|.:.:.   .||.:||.|   
  Fly    64 RKPLERNGSTQNHVVHLERRLGLFSGVALIVGTMIGSGIFVSPSGLLVRT---GSVGVSFIIWLA 125

  Fly    73 AALASLLAGVCYAEFGARVPKAGSAYVYSYVCIGEFVAFVIGW--NLILEYVIGTASVCRGISLY 135
            ..:.|||..:.|||.|.....:|:.:.|.....|...||:..|  .|:|: ....|.:|...:.|
  Fly   126 CGVLSLLGALAYAELGTMNTSSGAEWAYFMDAYGPAPAFLFSWVSTLVLK-PSQMAIICLSFAQY 189

  Fly   136 -LDSLLND------TLKYTFAEVAPMNVSFLGSYFDFLAFGLVVVFGVALAFGVETSTMANNFVT 193
             :::.:.:      .:|.. |.||.:.:.|:..|            .|.|...|:      |..|
  Fly   190 AVEAFVTECDPPRGVVKMV-ALVAIVMILFVNCY------------SVNLGMAVQ------NVFT 235

  Fly   194 CLNIFILGFVIIAGALKADYSNWTVDPSTVSANSTIGSGGFFPFGFEGTLRGAATCFF----GFV 254
            ...:..:..||..||       |.:........|...:|   |....|.:   ||.|:    .:.
  Fly   236 AAKLVAVVVVICGGA-------WKLMQGNTQHLSNAFNG---PMPNVGAI---ATAFYTGLWAYD 287

  Fly   255 GFDCIATTGEEVRNPRKNIPKSILLSLLIIFLCYFGVS-TVLTLMLPY-YIQDVNAPLPYAFEYV 317
            |::.:....||::||.||:|:||::.:.::.|||..:: :.|..|.|. .|:.....:.:....:
  Fly   288 GWNNLNYVTEEIKNPSKNLPRSIIIGIPLVTLCYALINISYLAAMSPQEMIESEAVAVTFGNRIL 352

  Fly   318 GWPVAMWIVTVGGLVGLLASLFGALFPLPRVMYSMAQDGLLFKFLGKVSPRFRVPVTGSIVAALF 382
            |  ...|::.:...:....|..|.||...|:.::.:::|.|...|..|..|...|..|.|..:|.
  Fly   353 G--ALAWLMPLSVTISTFGSANGTLFAAGRLCFAASREGHLLDILSYVHVRRLTPAPGLIFHSLI 415

  Fly   383 TAAIAGLFDLSQLVSLLSIGTLLAYSVVAISIMLLRYMDYCEVDENPGQREVRASETTSLTSSSE 447
            .:|:.....:..|:...|....:.|....::::::||                            
  Fly   416 ASAMVLHGTIDSLIDFFSFTAWIFYGGAMLALIVMRY---------------------------- 452

  Fly   448 RFTFGSVCTQLFNVHRVQEPNAISSRIVGVLSTLFCLISLGIGVLIMQAHLLIASKEVWALTLLI 512
                             .:||......|.::..:..|:   |.|.::.|.:....:..:...||.
  Fly   453 -----------------TKPNYPRPYKVPIIIPVVVLV---ISVYLVAAPIFETPRVEYLYALLF 497

  Fly   513 VLVVLMLLVICLICLQPREARRRLFRVPFVPI--VPAISIFINIYLMLQLD 561
            :...|                  :|.||||.:  .|.....:.::..|.|:
  Fly   498 IFAGL------------------IFYVPFVKLGMTPRFMNKVTLFFQLLLE 530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7255NP_001034016.1 2A0303 9..581 CDD:273330 121/571 (21%)
AA_permease_C 537..580 CDD:290617 8/27 (30%)
sbmNP_727785.1 2A0308 53..532 CDD:273332 121/571 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466570
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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