DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Best4 and BEST2

DIOPT Version :9

Sequence 1:NP_001097609.1 Gene:Best4 / 39660 FlyBaseID:FBgn0036491 Length:526 Species:Drosophila melanogaster
Sequence 2:NP_060152.2 Gene:BEST2 / 54831 HGNCID:17107 Length:509 Species:Homo sapiens


Alignment Length:379 Identity:180/379 - (47%)
Similarity:251/379 - (66%) Gaps:21/379 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTVTYTSRVSTSSVLSNFLGLLVRWRGSIYKLIWLDLIVFFGLYCLLAITYRLLVNEEGKRFFEA 65
            ||||||:||:.:. ...|..||:.||||||||:|.:|:.|.|.|..|:..||.::.|..||:||.
Human     1 MTVTYTARVANAR-FGGFSQLLLLWRGSIYKLLWRELLCFLGFYMALSAAYRFVLTEGQKRYFEK 64

  Fly    66 IMSYCEKNGSLIPLSFVLGFFVRIVMNRWWDQYTTIPWPDGIAILISTSIHGSDDRARVMRRTIL 130
            ::.||::..||||:||||||:|.:|:||||.||..:|.||.:..:::.::||.|||.|:.|||::
Human    65 LVIYCDQYASLIPVSFVLGFYVTLVVNRWWSQYLCMPLPDALMCVVAGTVHGRDDRGRLYRRTLM 129

  Fly   131 RYVCLCQVIVFTMISPRVKRRFPTYTQIIEAGFLLENEKKIIEAMDQAFPSYPKHWMPIVWAASI 195
            ||..|..|::...:|..|.:||||...::||||:...|:|..|.::.   ||.|:|:|.||.:::
Human   130 RYAGLSAVLILRSVSTAVFKRFPTIDHVVEAGFMTREERKKFENLNS---SYNKYWVPCVWFSNL 191

  Fly   196 VMRARRENKIRDDYAVKTIIDELNQLRGNCGFLLYYDWISVPLVYTQVVTVATYSFFLFSVLGQQ 260
            ..:||||.:|||:.|:|.:::|||..||.||.|.:|||||||||||||||:|.||:||..::|:|
Human   192 AAQARREGRIRDNSALKLLLEELNVFRGKCGMLFHYDWISVPLVYTQVVTIALYSYFLACLIGRQ 256

  Fly   261 W---NESHSDEDGTRIRRWFPILTVLQFFFYMGWLKVAETLINPFGEDDDDFELNWIIDRNLTVS 322
            :   .:.:.|.|   :....||.|:||||||.|||||||.|||||||||||||.|::||||..||
Human   257 FLDPAQGYKDHD---LDLCVPIFTLLQFFFYAGWLKVAEQLINPFGEDDDDFETNFLIDRNFQVS 318

  Fly   323 YCIVDEMHQEHPELVKDQYWEEVFPNEIPYAQPKMRQNPPAASTAYMESQSKLQ 376
            ...||||:.:...|.||.||:.        |:.:.   |..|:|.:...|...|
Human   319 MLAVDEMYDDLAVLEKDLYWDA--------AEARA---PYTAATVFQLRQPSFQ 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Best4NP_001097609.1 Bestrophin 8..319 CDD:279411 156/313 (50%)
BEST2NP_060152.2 Bestrophin 8..314 CDD:279411 155/312 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 454..509
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165155279
Domainoid 1 1.000 355 1.000 Domainoid score I996
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 396 1.000 Inparanoid score I1965
Isobase 1 0.950 - 0 Normalized mean entropy S3982
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D145964at33208
OrthoFinder 1 1.000 - - FOG0001515
OrthoInspector 1 1.000 - - mtm8455
orthoMCL 1 0.900 - - OOG6_101870
Panther 1 1.100 - - O PTHR10736
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2974
SonicParanoid 1 1.000 - - X320
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
1312.880

Return to query results.
Submit another query.