DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Best4 and best-8

DIOPT Version :9

Sequence 1:NP_001097609.1 Gene:Best4 / 39660 FlyBaseID:FBgn0036491 Length:526 Species:Drosophila melanogaster
Sequence 2:NP_493472.1 Gene:best-8 / 173285 WormBaseID:WBGene00007988 Length:512 Species:Caenorhabditis elegans


Alignment Length:521 Identity:167/521 - (32%)
Similarity:259/521 - (49%) Gaps:89/521 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTVTYTSRVSTSSVLSNFLGLLVRWRGSIYKLIWLDLIVFFGLYCLLAITYRLLVNEEGKRFFEA 65
            |||:|...||:.|.. ||..||.|||||::|.||.:|:::...|.|:.:|||:.:..|.|.....
 Worm     1 MTVSYNLDVSSVSFF-NFFKLLFRWRGSVWKSIWSELVLWLLGYYLVMVTYRVALTTEQKAGVRK 64

  Fly    66 IMSYCEKN-GSLIPLSFVLGFFVRIVMNRWWDQYTTIPWPDGIAILISTSIHGSDDRARVMRRTI 129
            .:.:.::| ...:||:|:|.|||.|:::||.:.:..|.:.:..||.|:|.:.|::....:.:|||
 Worm    65 YIDHLDQNLDKCVPLTFMLAFFVTIIVDRWKNMFANIGFIENTAIAIATLVKGTEGDVLLAKRTI 129

  Fly   130 LRYVCLCQVIVFTMISPRVKRRFPTYTQIIEAGFLLENEKKIIEAMDQAFPSYPKHWMPIVWAAS 194
            :||:.|.||:||..||.:|:||||.:..||:||||.::| .||...|....:|   |||:.|:::
 Worm   130 IRYLVLTQVLVFRDISLKVRRRFPNHDAIIKAGFLQDHE-SIILGGDNGRTNY---WMPVNWSSA 190

  Fly   195 IVMRARRENKIRDDYAVKTIIDELNQLRGNCGFLLYYDWISVPLVYTQVVTVATYSFFLFSVLGQ 259
            |:.:...:..|.......::..|:...|.|...|..|||:.:|:.|.|||..|...:|...:..:
 Worm   191 ILQKLFEDGNIPAAPLFNSVWQEVKTFRSNMATLCNYDWVPIPIAYPQVVFFAVRVYFFTCLFTR 255

  Fly   260 QWNESHSD-EDGTRIRRWFPILTVLQFFFYMGWLKVAETLINPFGEDDDDFELNWIIDRNLTVSY 323
            |    |.| ||...|..:||||||.||.|:|||:||||.|:||.||||||||.|::||||:....
 Worm   256 Q----HLDMEDTKTIDYYFPILTVFQFTFFMGWMKVAEALLNPLGEDDDDFECNYLIDRNIATGM 316

  Fly   324 CIVDEMHQEHPELVKDQYWEEVFPNEIPY-----------------------AQP-------KMR 358
            .||:..:.:.||::.|::.:   |:..||                       |:|       |:.
 Worm   317 AIVNSKYSDVPEMLADKFND---PSYAPYYPEKVIDSGADHALVGSAQTVTLAEPNDIIDMMKVD 378

  Fly   359 QNPP-AASTAYMESQSKLQKRHESAMSTLSTRSRNNFRQNFLG--RPSATGSYSDSIQME----- 415
            .|.| ........:.|.:::|..||.      .|.:.....||  :|..|..:|.|:..:     
 Worm   379 LNSPIVVGRRNTNNTSTIRRRLSSAF------GRRSHSVQHLGPEKPEPTSPFSQSMAPQRPYGA 437

  Fly   416 ---------DGPSRVTFSENQFDLPHDEANS-------------------SHKPSQSTIDFNDLI 452
                     .|.|.:|   :|..||..|..|                   |.:|:..|:.|:..:
 Worm   438 FELSNGFNLSGLSGIT---SQSHLPKLEEESETTDPLPAQQPVFVLPRTLSEEPTSPTLPFDQTL 499

  Fly   453 E 453
            |
 Worm   500 E 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Best4NP_001097609.1 Bestrophin 8..319 CDD:279411 125/312 (40%)
best-8NP_493472.1 Bestrophin 8..312 CDD:279411 125/312 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3547
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28981
OrthoDB 1 1.010 - - D145964at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101870
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.730

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