DRSC/TRiP Functional Genomics Resources

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Protein Alignment Best4 and BEST3

DIOPT Version :9

Sequence 1:NP_001097609.1 Gene:Best4 / 39660 FlyBaseID:FBgn0036491 Length:526 Species:Drosophila melanogaster
Sequence 2:NP_116124.2 Gene:BEST3 / 144453 HGNCID:17105 Length:668 Species:Homo sapiens


Alignment Length:594 Identity:210/594 - (35%)
Similarity:308/594 - (51%) Gaps:98/594 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTVTYTSRVSTSSVLSNFLGLLVRWRGSIYKLIWLDLIVFFGLYCLLAITYRLLVNEEGKRFFEA 65
            |||||:|:|:.::.. .|..||::||||||||::.:.|||..||..:::.||||:....||:||.
Human     1 MTVTYSSKVANATFF-GFHRLLLKWRGSIYKLLYREFIVFAVLYTAISLVYRLLLTGVQKRYFEK 64

  Fly    66 IMSYCEKNGSLIPLSFVLGFFVRIVMNRWWDQYTTIPWPDGIAILISTSIHGSDDRARVMRRTIL 130
            :..||::....||::|||||:|.:|:||||:|:..:||||.:..|||:|:||||:..|::|||::
Human    65 LSIYCDRYAEQIPVTFVLGFYVTLVVNRWWNQFVNLPWPDRLMFLISSSVHGSDEHGRLLRRTLM 129

  Fly   131 RYVCLCQVIVFTMISPRVKRRFPTYTQIIEAGFLLENEKKIIEAMDQAFPSYPKHWMPIVWAASI 195
            |||.|..:::|..:|..|.:||||...::||||:..:|:|:...:..   .:.|:|:|.:|..::
Human   130 RYVNLTSLLIFRSVSTAVYKRFPTMDHVVEAGFMTTDERKLFNHLKS---PHLKYWVPFIWFGNL 191

  Fly   196 VMRARRENKIRDDYAVKTIIDELNQLRGNCGFLLYYDWISVPLVYTQVVTVATYSFFLFSVLGQQ 260
            ..:||.|.:|||...:::::.|:|:.|..|..|..|||:.:|||||||||:|.|:||...::|:|
Human   192 ATKARNEGRIRDSVDLQSLMTEMNRYRSWCSLLFGYDWVGIPLVYTQVVTLAVYTFFFACLIGRQ 256

  Fly   261 WNESHSDEDGTRIRRWFPILTVLQFFFYMGWLKVAETLINPFGEDDDDFELNWIIDRNLTVSYCI 325
            :.:......|..:..:.||.|:||||||.|||||||.|||||||||||||.||.|||||.||...
Human   257 FLDPTKGYAGHDLDLYIPIFTLLQFFFYAGWLKVAEQLINPFGEDDDDFETNWCIDRNLQVSLLA 321

  Fly   326 VDEMHQEHPELVKDQYWEEVFPNEIPYAQPKMRQNPPA--ASTAYM------------------- 369
            |||||...|::.||.||::..... ||.........|:  .||..|                   
Human   322 VDEMHMSLPKMKKDIYWDDSAARP-PYTLAAADYCIPSFLGSTVQMGLSGSDFPDEEWLWDYEKH 385

  Fly   370 ---ESQSKLQKRHESAMSTLSTRSRNNFRQN------FLGR-----------------PSATGSY 408
               .|..:..||..||....|:..|.::|:.      ||.|                 |.|:.::
Human   386 GHRHSMIRRVKRFLSAHEHPSSPRRRSYRRQTSDSSMFLPRDDLSPARDLLDVPSRNPPRASPTW 450

  Fly   409 SDSIQMEDGPSRVTFSENQFDLPHDEANSSHKPS---QSTIDFNDLIEQRRRERRERIRHRFLD- 469
            ..|...|..|: :.||..:.....:.:.:|...|   ||::            |...|:...:. 
Human   451 KKSCFPEGSPT-LHFSMGELSTIRETSQTSTLQSLTPQSSV------------RTSPIKMPLVPE 502

  Fly   470 ----------MQSTHLRHD--TSGAPYTITVLRPPSDETLSESQEAGDRAQQDPSGS------KE 516
                      ..|....||  ||......|.::|...|           .||.|.||      ||
Human   503 VLITAAEAPVPTSGGYHHDSATSILSSEFTGVQPSKTE-----------QQQGPMGSILSPSEKE 556

  Fly   517 PPPNKTEKQ 525
            .||.....|
Human   557 TPPGGPSPQ 565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Best4NP_001097609.1 Bestrophin 8..319 CDD:279411 142/310 (46%)
BEST3NP_116124.2 Bestrophin 8..315 CDD:307280 142/310 (46%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 400..454 10/53 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 473..493 5/31 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 532..570 13/45 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165155285
Domainoid 1 1.000 355 1.000 Domainoid score I996
eggNOG 1 0.900 - - E1_KOG3547
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 396 1.000 Inparanoid score I1965
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D145964at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8455
orthoMCL 1 0.900 - - OOG6_101870
Panther 1 1.100 - - O PTHR10736
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2974
SonicParanoid 1 1.000 - - X320
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1312.790

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