DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tak1 and LIMK1

DIOPT Version :9

Sequence 1:NP_524080.1 Gene:Tak1 / 39659 FlyBaseID:FBgn0026323 Length:678 Species:Drosophila melanogaster
Sequence 2:NP_511139.2 Gene:LIMK1 / 32207 FlyBaseID:FBgn0283712 Length:1257 Species:Drosophila melanogaster


Alignment Length:739 Identity:160/739 - (21%)
Similarity:278/739 - (37%) Gaps:222/739 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 SEITLREKVGHGSYGVVCKAVWRD--KLVAVKEFFASAE--QKDIEKEVKQLSRVKHPNIIALHG 77
            :::.:.||:|.|.:|.|.|...|.  :::.:||...:.|  |::..|||..|..:.|.:::...|
  Fly   399 TDLVIGEKLGEGFFGKVFKVTHRQSGEVMVLKELHRADEEAQRNFIKEVAVLRLLDHRHVLKFIG 463

  Fly    78 ISSYQQATYLIMEFAEGGSLHNFLHGKVKPAYSLAHAMSW------ARQCAEGLAYLHAMTPKPL 136
            :....:..:::.|:..||.|...:|..       |..:.|      ||..|.|::|||:|.   :
  Fly   464 VLYKDKKLHMVTEYVAGGCLKELIHDP-------AQVLPWPQRVRLARDIACGMSYLHSMN---I 518

  Fly   137 IHRDVKPLNLLLTNKGRNLKICDFGTVAD-------KSTMMTNNRGSAA---------------- 178
            ||||:..:|.|: .:.|::.:.|||....       ...|.....||.|                
  Fly   519 IHRDLNSMNCLV-REDRSVIVADFGLARSVDAPRLPSGNMTPGGYGSGANSDAPMSPSGTLRRSK 582

  Fly   179 ---------------WMAPEVFEGSKYTEKCDIFSWAIVLWEVLSRKQ---PFKGIDNAYTIQWK 225
                           |||||:.:|.||.||.|:||:.|:|.|::.|.:   .|...::.:::..:
  Fly   583 SRQRRQRYTVVGNPYWMAPEMMKGLKYDEKVDVFSFGIMLCEIIGRVEADPDFMPRNSDFSLNQQ 647

  Fly   226 IYKGERPPLLTTCPKRIEDLMTACWKTVPEDRPSMQYIVGVMHEIVKDYTGADKALEYTFVNQQI 290
            .:   |......||:....:...|....|:.||..: .:.|..:.:.|...||:......:::  
  Fly   648 EF---REKFCAQCPEPFVKVAFVCCDLNPDMRPCFE-TLHVWLQRLADDLAADRVPPERLLHE-- 706

  Fly   291 VTKESDGTVAAQPDSLSSQEGELSPSSTQLTPTTAANANVNAIAISKTTTSSMTENTSSTSSDIT 355
                    :....:..:|.|..|||:|.:     :.| |::.:.            .|:..|:|:
  Fly   707 --------IETFQEWYASSEDALSPTSQR-----SLN-NLDELV------------KSAVDSEIS 745

  Fly   356 PTNSGQLDNNPLFYMVTNRWDAIPE--------EESNESRNDSF----------------NLTSS 396
            |... :.:|     ||....| ||:        ..|.|...||.                |||..
  Fly   746 PVEK-EKEN-----MVIKPQD-IPKSPHLGKDFSPSGERLRDSMRARRRQRFLGAQEERRNLTPD 803

  Fly   397 AEATQRLETIRNGMILMACKPMEQ--LTLDVEANGFDLSPSESSSSSTNAKSDGRERLTVTDTKP 459
            .|:.:|  .::..  |..|:|..:  ..:|:.| |.:|.           ..|.|:..|.:|   
  Fly   804 TESKER--ALKKA--LKKCRPFGERGYLVDLRA-GAELQ-----------LEDVRDLNTYSD--- 849

  Fly   460 VMMTTDLSNNNGGIHAHSNGLLSHANGWQARDEELQEQEHEQEIVNSLDVDVDPDEDEN---DGT 521
            |..:.|.|.|                            .|:   ||:|..   ..||||   .|.
  Fly   850 VDSSCDTSLN----------------------------YHD---VNNLPA---AQEDENTVKPGK 880

  Fly   522 EQSLAEILDPELQPEPPIPNDAESQLIYRDHRHMAKEYLSVD---TNLYYAQDFKDKLIVQMDRT 583
            |:.|.|..:.        |::.|||    .||      |::|   |.|...:. |.:.:.:..|.
  Fly   881 EELLEESTNK--------PSNQESQ----HHR------LAIDDMRTRLNQCRS-KFEHLEEASRR 926

  Fly   584 EREQKQELLRK-MKDKEGLQSLYNNLQQQYASRQLAAGHHPQPHPHPHPNQL-QHP---HSHPPM 643
            ...|.|..::. .|.......::..|:.:.|:  |..|::..| |.|...:: |.|   ..:||:
  Fly   927 NFNQSQHSMKNFFKTPPVALKMFQRLEHEAAA--LNGGNNCPP-PPPRTQRINQTPIFGRKNPPV 988

  Fly   644 HFLQDEGCGLLPGSVCGGSESVEE 667
                     .:.|.....:||:|:
  Fly   989 ---------AIVGQKLQHAESLED 1003

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tak1NP_524080.1 TyrKc 19..264 CDD:197581 72/295 (24%)
STKc_TAK1 25..275 CDD:270960 72/300 (24%)
LIMK1NP_511139.2 LIM1_LIMK 33..88 CDD:188750
LIM2_LIMK 95..148 CDD:188751
PDZ_signaling 172..271 CDD:238492
STKc_LIMK 407..693 CDD:271056 72/300 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45445220
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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