DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tak1 and LRRK2

DIOPT Version :9

Sequence 1:NP_524080.1 Gene:Tak1 / 39659 FlyBaseID:FBgn0026323 Length:678 Species:Drosophila melanogaster
Sequence 2:NP_940980.4 Gene:LRRK2 / 120892 HGNCID:18618 Length:2527 Species:Homo sapiens


Alignment Length:461 Identity:107/461 - (23%)
Similarity:200/461 - (43%) Gaps:77/461 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 VGHGSYGVVCKAVWRDKLVAVKEFFASAEQKDIEKEVKQLSRVKHPNIIALHGISSYQQATYLIM 89
            :|.||:|.|.:|.:..:.||||.|......:.:.:|:..|..:.||::|:|  :::..:...|:|
Human  1885 LGDGSFGSVYRAAYEGEEVAVKIFNKHTSLRLLRQELVVLCHLHHPSLISL--LAAGIRPRMLVM 1947

  Fly    90 EFAEGGSLHNFL-HGKVKPAYSLAHAMSWARQCAEGLAYLHAMTPKPLIHRDVKPLNLLL----T 149
            |.|..|||...| ..|.....:|.|.:  |...|:||.|||:..   :|:||:||.|:||    .
Human  1948 ELASKGSLDRLLQQDKASLTRTLQHRI--ALHVADGLRYLHSAM---IIYRDLKPHNVLLFTLYP 2007

  Fly   150 NKGRNLKICDFGTVADKSTMM--TNNRGSAAWMAPEVFEGSK-YTEKCDIFSWAIVLWEVLS--- 208
            |.....||.|:| :|.....|  ..:.|:..:.||||..|:. |.::.|::|:.::|:::|:   
Human  2008 NAAIIAKIADYG-IAQYCCRMGIKTSEGTPGFRAPEVARGNVIYNQQADVYSFGLLLYDILTTGG 2071

  Fly   209 ---RKQPFKGIDNAYTIQWKI------YKGERPPLLTTCPKRIEDLMTACWKTVPEDRPSMQYIV 264
               ....|....:...||.|:      |.....|:       :|.|:..|.|..|::||:...:.
Human  2072 RIVEGLKFPNEFDELEIQGKLPDPVKEYGCAPWPM-------VEKLIKQCLKENPQERPTSAQVF 2129

  Fly   265 GVMHEIVKDYTGADKALEYTFVNQQIVTKES---DGTVAAQPDSLS---------SQEGELS--- 314
            .:::           :.|...:.::|:..::   :..||...:|.:         :..|:||   
Human  2130 DILN-----------SAELVCLTRRILLPKNVIVECMVATHHNSRNASIWLGCGHTDRGQLSFLD 2183

  Fly   315 PSSTQLTPTTAANANVNAIAISKTTTSSMTENTSSTSSD---ITPTNSGQLDNNPLFYMVTNRWD 376
            .::...|....|::.:..:|:........:...|.|.|.   :..|..|: ..:.|..|..:...
Human  2184 LNTEGYTSEEVADSRILCLALVHLPVEKESWIVSGTQSGTLLVINTEDGK-KRHTLEKMTDSVTC 2247

  Fly   377 AIPEEESNESRNDSFNLTSSAEATQRL---ETIRNGMILMACKPMEQLTLDVEANGFDLSPSESS 438
            ......|.:|:..:|.|..:|:....:   :|::    |....|::.|.:     |...:|....
Human  2248 LYCNSFSKQSKQKNFLLVGTADGKLAIFEDKTVK----LKGAAPLKILNI-----GNVSTPLMCL 2303

  Fly   439 SSSTNA 444
            |.|||:
Human  2304 SESTNS 2309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tak1NP_524080.1 TyrKc 19..264 CDD:197581 74/258 (29%)
STKc_TAK1 25..275 CDD:270960 74/269 (28%)
LRRK2NP_940980.4 Required for RAB29-mediated activation. /evidence=ECO:0000269|PubMed:29212815 1..969
LRR 1 983..1004
leucine-rich repeat 985..1012 CDD:275380
LRR 1012..>1286 CDD:227223
LRR 2 1012..1033
leucine-rich repeat 1013..1036 CDD:275380
LRR 3 1036..1057
leucine-rich repeat 1037..1084 CDD:275380
LRR 4 1059..1080
LRR 5 1084..1105
leucine-rich repeat 1085..1108 CDD:275380
LRR 6 1108..1129
leucine-rich repeat 1109..1130 CDD:275380
LRR 7 1130..1150
leucine-rich repeat 1131..1174 CDD:275380
LRR 8 1174..1196
leucine-rich repeat 1175..1197 CDD:275380
LRR 9 1197..1218
leucine-rich repeat 1198..1221 CDD:275380
LRR 10 1221..1241
leucine-rich repeat 1222..1246 CDD:275380
LRR 11 1246..1267
leucine-rich repeat 1247..1269 CDD:275380
LRR 12 1269..1291
RocCOR 1334..1507 CDD:206741
COR 1527..1740 CDD:318343
STKc_LRRK2 1884..2135 CDD:270970 74/275 (27%)
WD 1 2139..2183 7/43 (16%)
WD 2 2188..2228 6/39 (15%)
WD 3 2233..2276 7/43 (16%)
WD 4 2281..2327 9/38 (24%)
WD 5 2333..2377
WD 6 2402..2438
WD 7 2443..2497
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0192
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.