DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6888 and prdx1

DIOPT Version :9

Sequence 1:NP_648759.1 Gene:CG6888 / 39658 FlyBaseID:FBgn0036490 Length:196 Species:Drosophila melanogaster
Sequence 2:NP_001013489.2 Gene:prdx1 / 541344 ZFINID:ZDB-GENE-050320-35 Length:199 Species:Danio rerio


Alignment Length:189 Identity:105/189 - (55%)
Similarity:140/189 - (74%) Gaps:1/189 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 NINQVAPNFTTNAVV-SGGYRNFALTDLRGRYVLLVFYPADFSYVCPTELQAFSDRAPEFRNVGC 68
            :|.:.||:||..||: .|.:.:..|:|.:|:||:|.|||.||::|||||:.||||.|.|||.:.|
Zfish     7 HIGKPAPDFTAKAVMPDGQFGDVRLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSDAAEEFRKINC 71

  Fly    69 EVLACSTDSHFVHCAWMNTPRKNGGLGELDIPLLADKNMKIARDYGVLDEDTGLALRALFIIDRE 133
            |::..|.||||.|.||..||||.||||.:::||:||....|::|||||.||.|:|.|.|||||.:
Zfish    72 EIIGASVDSHFCHLAWTKTPRKQGGLGPMNVPLVADTLRSISKDYGVLKEDEGIAYRGLFIIDDK 136

  Fly   134 GRIRQITVNDMGVGRSVDEALRLVQAFQFSDEFGEVCPVNWRPGAKTMKADATGKEEYF 192
            |.:||||:||:.||||:||.|||||||||:|:.|||||..|:||..|:|.|....:::|
Zfish   137 GILRQITINDLPVGRSIDETLRLVQAFQFTDKHGEVCPAGWKPGKDTIKPDVNQSKDFF 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6888NP_648759.1 AhpC 3..194 CDD:223527 105/189 (56%)
PRX_Typ2cys 6..177 CDD:239313 99/171 (58%)
prdx1NP_001013489.2 PTZ00253 1..199 CDD:140280 105/189 (56%)
PRX_Typ2cys 8..180 CDD:239313 99/171 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0450
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54000
OrthoDB 1 1.010 - - D1326484at2759
OrthoFinder 1 1.000 - - FOG0000434
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100111
Panther 1 1.100 - - O PTHR10681
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X272
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
98.790

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