DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6888 and Prdx4

DIOPT Version :9

Sequence 1:NP_648759.1 Gene:CG6888 / 39658 FlyBaseID:FBgn0036490 Length:196 Species:Drosophila melanogaster
Sequence 2:NP_001300640.1 Gene:Prdx4 / 53381 MGIID:1859815 Length:275 Species:Mus musculus


Alignment Length:191 Identity:99/191 - (51%)
Similarity:133/191 - (69%) Gaps:14/191 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 INQVAPNFTTNAVVSGGYRNFALTDLRGRYVLLVFYPADFSYVCPTELQAFSDRAPEFRNVGCEV 70
            |::.||.:...||::|.::...|||.||:|::..|||.||::|||||:.||.||..||:::..||
Mouse    84 ISKPAPYWEGTAVINGEFKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRIEEFKSINTEV 148

  Fly    71 LACSTDSHFVHCAWMNTPRKNGGLGELDIPLLADKNMKIARDYGVLDEDTGLALRALFIIDREGR 135
            :|||.||.|.|.||:||||:.||||.:.||||:|.|.:|::||||..||:|..||.|||||.:|.
Mouse   149 VACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLNHQISKDYGVYLEDSGHTLRGLFIIDDKGV 213

  Fly   136 IRQITVNDMGVGRSVDEALRLVQAFQFSDEFGEVCP-VNWRPGAKTMKADATGKEEYFKHA 195
            :||||:||:.|||||||.||||||||::|:.||..| .:|             |.|.|:.|
Mouse   214 LRQITLNDLPVGRSVDETLRLVQAFQYTDKHGEDNPRSSW-------------KTEVFRQA 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6888NP_648759.1 AhpC 3..194 CDD:223527 98/188 (52%)
PRX_Typ2cys 6..177 CDD:239313 95/171 (56%)
Prdx4NP_001300640.1 PRX_Typ2cys 84..254 CDD:239313 95/182 (52%)
AhpC-TSA 84..217 CDD:278975 70/132 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0450
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54000
OrthoDB 1 1.010 - - D1326484at2759
OrthoFinder 1 1.000 - - FOG0000434
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100111
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X272
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.730

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