DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6888 and prdx4

DIOPT Version :9

Sequence 1:NP_648759.1 Gene:CG6888 / 39658 FlyBaseID:FBgn0036490 Length:196 Species:Drosophila melanogaster
Sequence 2:NP_001006812.1 Gene:prdx4 / 448526 XenbaseID:XB-GENE-976761 Length:271 Species:Xenopus tropicalis


Alignment Length:187 Identity:105/187 - (56%)
Similarity:139/187 - (74%) Gaps:0/187 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 INQVAPNFTTNAVVSGGYRNFALTDLRGRYVLLVFYPADFSYVCPTELQAFSDRAPEFRNVGCEV 70
            |::.||.:...||::|.::...|||.:|:|::..|||.||::|||||:.||.||..|||::..||
 Frog    81 ISKPAPYWEGTAVINGEFKELKLTDYKGKYLVFFFYPLDFTFVCPTEIIAFGDRIEEFRSINTEV 145

  Fly    71 LACSTDSHFVHCAWMNTPRKNGGLGELDIPLLADKNMKIARDYGVLDEDTGLALRALFIIDREGR 135
            :|||.||.|.|.||:|||||.||||.:.||||:|...:|::||||..||.|..||.|||||.:|.
 Frog   146 VACSVDSQFTHLAWINTPRKQGGLGPMKIPLLSDLTHQISKDYGVYLEDQGHTLRGLFIIDDKGV 210

  Fly   136 IRQITVNDMGVGRSVDEALRLVQAFQFSDEFGEVCPVNWRPGAKTMKADATGKEEYF 192
            :||||:||:.|||||||.||||||||::|..|||||..|:||::|:..|..||.:||
 Frog   211 LRQITMNDLPVGRSVDETLRLVQAFQYTDTHGEVCPAGWKPGSETIIPDPAGKLKYF 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6888NP_648759.1 AhpC 3..194 CDD:223527 105/187 (56%)
PRX_Typ2cys 6..177 CDD:239313 97/170 (57%)
prdx4NP_001006812.1 PRX_Typ2cys 81..252 CDD:239313 97/170 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1326484at2759
OrthoFinder 1 1.000 - - FOG0000434
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X272
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.010

Return to query results.
Submit another query.