DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6878 and ROMO1

DIOPT Version :9

Sequence 1:NP_648757.1 Gene:CG6878 / 39656 FlyBaseID:FBgn0036488 Length:79 Species:Drosophila melanogaster
Sequence 2:NP_542786.1 Gene:ROMO1 / 140823 HGNCID:16185 Length:79 Species:Homo sapiens


Alignment Length:79 Identity:49/79 - (62%)
Similarity:62/79 - (78%) Gaps:0/79 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPLPTSSFSQQGPTCFDKMKTGFIIGFCVGMASGAVFGGFSALRYGLRGRELINNVGKTMVQGGG 65
            ||:....:.|..|:|||::|.||::|..||||:||:||.||.||.|:|||||:..:||||:|.||
Human     1 MPVAVGPYGQSQPSCFDRVKMGFVMGCAVGMAAGALFGTFSCLRIGMRGRELMGGIGKTMMQSGG 65

  Fly    66 TFGTFMAIGTGIRC 79
            |||||||||.||||
Human    66 TFGTFMAIGMGIRC 79

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6878NP_648757.1 Romo1 14..79 CDD:402038 43/64 (67%)
ROMO1NP_542786.1 Romo1 14..79 CDD:402038 43/64 (67%)
Sufficient for antibacterial activity 42..60 10/17 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 102 1.000 Domainoid score I6881
eggNOG 1 0.900 - - E1_KOG4096
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H7096
Inparanoid 1 1.050 112 1.000 Inparanoid score I4870
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48599
OrthoDB 1 1.010 - - D1635599at2759
OrthoFinder 1 1.000 - - FOG0004057
OrthoInspector 1 1.000 - - oto91396
orthoMCL 1 0.900 - - OOG6_105143
Panther 1 1.100 - - LDO PTHR28525
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R715
SonicParanoid 1 1.000 - - X3897
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1514.870

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