DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6878 and romo1

DIOPT Version :9

Sequence 1:NP_648757.1 Gene:CG6878 / 39656 FlyBaseID:FBgn0036488 Length:79 Species:Drosophila melanogaster
Sequence 2:NP_001165117.1 Gene:romo1 / 100125151 XenbaseID:XB-GENE-982441 Length:79 Species:Xenopus tropicalis


Alignment Length:79 Identity:51/79 - (64%)
Similarity:64/79 - (81%) Gaps:0/79 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPLPTSSFSQQGPTCFDKMKTGFIIGFCVGMASGAVFGGFSALRYGLRGRELINNVGKTMVQGGG 65
            ||:....:.|..|:|||::|.||::||.||||:||:||.||.||:|:|||||:..|||||:|.||
 Frog     1 MPVAVGPYGQSQPSCFDRVKMGFMMGFAVGMAAGALFGTFSCLRFGMRGRELMGGVGKTMMQSGG 65

  Fly    66 TFGTFMAIGTGIRC 79
            |||||||||.||||
 Frog    66 TFGTFMAIGMGIRC 79

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6878NP_648757.1 Romo1 14..79 CDD:402038 45/64 (70%)
romo1NP_001165117.1 Romo1 14..79 CDD:370917 45/64 (70%)
Sufficient for antibacterial activity. /evidence=ECO:0000250 42..60 11/17 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 107 1.000 Domainoid score I6462
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H7096
Inparanoid 1 1.050 116 1.000 Inparanoid score I4671
OMA 1 1.010 - - QHG48599
OrthoDB 1 1.010 - - D1635599at2759
OrthoFinder 1 1.000 - - FOG0004057
OrthoInspector 1 1.000 - - oto105164
Panther 1 1.100 - - LDO PTHR28525
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R715
SonicParanoid 1 1.000 - - X3897
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.110

Return to query results.
Submit another query.