DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prp31 and emb1220

DIOPT Version :9

Sequence 1:NP_648756.1 Gene:Prp31 / 39655 FlyBaseID:FBgn0036487 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_564754.1 Gene:emb1220 / 842312 AraportID:AT1G60170 Length:485 Species:Arabidopsis thaliana


Alignment Length:503 Identity:224/503 - (44%)
Similarity:311/503 - (61%) Gaps:37/503 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SLADELLADLEEDNDNEL-----------EEEDSEMASAEDESLLAEKLAKPAPNLMDVDVTVQS 55
            :|.|..||||:|.:|||.           ||||.:|..|:.|:|          |..|:|     
plant     3 TLEDSFLADLDELSDNEAELDENDGDVGKEEEDVDMDMADLETL----------NYDDLD----- 52

  Fly    56 VRELCKLRDSERLKNTLQQIEHYASRQRTAAEMLGSVESDPEYCLIVDANAIAVDIDNEISIVHK 120
              .:.||:.|:|..:.:.::|....:....||....:|.||||.||||.|.::|||:|||.|||.
plant    53 --NVSKLQKSQRYADIMHKVEEALGKDSDGAEKGTVLEDDPEYKLIVDCNQLSVDIENEIVIVHN 115

  Fly   121 FTKEKYQKRFPELDSLIVGEIEYLLAVKELGNDLDQVKNNEKLQAILTQATIMIVSVTASTTQGT 185
            |.|:||:.:|.||:||:...|:|...||::||:.|....:  |..:|..|.||:|||||.||:|:
plant   116 FIKDKYKLKFQELESLVHHPIDYACVVKKIGNETDLALVD--LADLLPSAIIMVVSVTALTTKGS 178

  Fly   186 MLTPAEKAKIDEACEMAIELNNFKSKIYEYVESRMTFIAPNLSMIVGASTAAKLLGIAGGLSKLS 250
            .|......|:.|||:.|::|::.:.|:.|:|||:|..||||||.|||::.||||:|.|||||.|:
plant   179 ALPEDVLQKVLEACDRALDLDSARKKVLEFVESKMGSIAPNLSAIVGSAVAAKLMGTAGGLSALA 243

  Fly   251 KMPACNVQVLGAQKKTLSGFSQTQMLPHTGYVYYSQIVQDTAPDLRRKAARLVAAKSVLAARVDA 315
            |||||||||||.::|.|:|||........||:..::|.|.|.|.|:.:|.|||||||.|||||||
plant   244 KMPACNVQVLGHKRKNLAGFSSATSQSRVGYLEQTEIYQSTPPGLQARAGRLVAAKSTLAARVDA 308

  Fly   316 CHESVHGEIGLRFKEDVEKKLDKLQEPPPVKFIKPLPKPIEGSKKKRGGKRVRKMKERYALTEFR 380
            ......|..|..|:|::.||::|.|||||.:..||||.|....||:|||:|:|||||||.:|:.|
plant   309 TRGDPLGISGKAFREEIRKKIEKWQEPPPARQPKPLPVPDSEPKKRRGGRRLRKMKERYQVTDMR 373

  Fly   381 KQANRMNFGDIEEDAYQGDLGYSRGTIGKTGTGRIRLPQVDEKTKVRISKTLHKNLQKQQVYGGN 445
            |.||||.||..||.:....||...|.:|:.|:.|:|:..|  .:|::|:..:.|.|:::|..||.
plant   374 KLANRMAFGTPEESSLGDGLGEGYGMLGQAGSNRLRVSSV--PSKLKINAKVAKKLKERQYAGGA 436

  Fly   446 TTVKRQISGTASSVAFTPLQGLEIVNPQAAERSQTEANAKYFSNTSGF 493
            ||     ||..||:||||:||:|:.|||.|....:...:.|||.:..|
plant   437 TT-----SGLTSSLAFTPVQGIELCNPQQALGLGSGTQSTYFSESGTF 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prp31NP_648756.1 NOSIC 101..152 CDD:197999 26/50 (52%)
Nop 107..337 CDD:280047 115/229 (50%)
Prp31_C 345..472 CDD:286825 57/126 (45%)
emb1220NP_564754.1 Nop 103..331 CDD:396390 115/229 (50%)
Prp31_C 338..458 CDD:401657 57/126 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 215 1.000 Domainoid score I759
eggNOG 1 0.900 - - E1_COG1498
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5980
Inparanoid 1 1.050 385 1.000 Inparanoid score I516
OMA 1 1.010 - - QHG54654
OrthoDB 1 1.010 - - D791296at2759
OrthoFinder 1 1.000 - - FOG0004373
OrthoInspector 1 1.000 - - oto3908
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR13904
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4161
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.940

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