DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prp31 and nop56

DIOPT Version :9

Sequence 1:NP_648756.1 Gene:Prp31 / 39655 FlyBaseID:FBgn0036487 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_957511.2 Gene:nop56 / 394196 ZFINID:ZDB-GENE-040109-1 Length:548 Species:Danio rerio


Alignment Length:370 Identity:83/370 - (22%)
Similarity:166/370 - (44%) Gaps:50/370 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 LIVDANAIAVDIDNEISIVHKFTKEKYQKRFPELDSLIVGEIEYLLAVKELGNDLDQVKNNEKLQ 164
            :|:.:.|:...:|.:|:......:|.|...||||..::.....|....|.:||..:  .:.|.|:
Zfish   168 MIIQSIALLDQLDKDINTFSMRVREWYGYHFPELIKIVSDNSTYCKLAKLIGNRKE--LSEEMLE 230

  Fly   165 AI----LTQATIMIVSVTASTTQGTMLTPAEKAKIDEACEMAIELNNFKSKIYEYVESRMTFIAP 225
            |:    :..|....:...:.::.|..::|.:...|:......:.|.:::.::.||:.|:|..:||
Zfish   231 AMEEITMDSAKAQAILDASRSSMGMDISPIDLINIECFSSRVVSLTDYRQELQEYLRSKMGQVAP 295

  Fly   226 NLSMIVGASTAAKLLGIAGGLSKLSKMPACNVQVLGAQKKTLSGFSQTQMLPHTGYVYYSQIVQD 290
            ||:.::|....|:|:..||.|:.|:|.||..||:|||:|............|..|.:::|..:..
Zfish   296 NLAALIGEVVGARLISHAGSLTNLAKYPASTVQILGAEKALFRALKTRGNTPKYGLIFHSTFIGR 360

  Fly   291 TAPDLRRKAARLVAAKSVLAARVDACHESVHGEIGLRFKEDVE-------------KKLDKLQE- 341
            .|...:.:.:|.:|.|..:|:|:|...|......|.:.::.||             |.||.::| 
Zfish   361 AAAKNKGRISRYLANKCTIASRIDCFSEVPTSVFGDKLRDQVEERLAFYETGEAPRKNLDVMKEA 425

  Fly   342 -PPPVKFIKPLPKPIEGSKKKRGGKRVRKMKERYALTEFRKQANRMNFGDIEEDAYQGDLGYSRG 405
             ....:....:.:.:|..:||:  |:.:|..|..:..|..::.|    ||:||:           
Zfish   426 VAQASEVAAEIKRKLEKKEKKK--KKRQKKLEALSTAEGDEETN----GDVEEN----------- 473

  Fly   406 TIGKTGTGRIRLPQVDEKTKVR---------ISKTLHKNLQKQQV 441
               :..|.:.:..|..|:.:|:         :.:|..|..:|:::
Zfish   474 ---EVATKKKKKKQAAEEMEVKEDEEVTTNGVEETPGKKKKKRKI 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prp31NP_648756.1 NOSIC 101..152 CDD:197999 12/50 (24%)
Nop 107..337 CDD:280047 59/246 (24%)
Prp31_C 345..472 CDD:286825 19/106 (18%)
nop56NP_957511.2 NOP5NT 5..70 CDD:285382
SIK1 47..414 CDD:224415 60/247 (24%)
NOSIC 169..220 CDD:197999 12/50 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1498
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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