Sequence 1: | NP_648755.1 | Gene: | Msh6 / 39654 | FlyBaseID: | FBgn0036486 | Length: | 1190 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_010016.2 | Gene: | MSH3 / 850454 | SGDID: | S000000688 | Length: | 1018 | Species: | Saccharomyces cerevisiae |
Alignment Length: | 1182 | Identity: | 288/1182 - (24%) |
---|---|---|---|
Similarity: | 480/1182 - (40%) | Gaps: | 280/1182 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 88 KRIVQPESDSEPEMEVTKSEDDFSDCASDYEPDENEASDDSVSSGAEEVSPSENDMSVDSPT--- 149
Fly 150 ---PKKSRKKSKILNNNNNNEPSSKKVKLESTIQLAEGATFQEKLKNL---QSNAKQDASYDDIV 208
Fly 209 TNTSNLDEPVVWPHQKLEFLQPDKIKDKEGRRPDHPDYDKSTLHVPEKFLNGLSPGVRQWWVLKS 273
Fly 274 DNYDCVLFFKVGKFYELYHMDADVGVNELGFTYMRG---------------EFAHSGFPEISFDK 323
Fly 324 MSTILVDRGFKVARVEQTETPDMMTERCKRIKATKFDKVVAREICQIT--------NRGTQVFGS 380
Fly 381 QCKIGPNHQPNYMLAIVEKD--EGTCSRYGVCFIDTSIGDFHLGEFEDDKNCSRLLTL-VSHHMP 442
Fly 443 VLFLNEKSALSQRTQQIVRTVLGGILKEPVPGNGKHACSAEKTLKLLAERYYAGPGSDDNWPLVL 507
Fly 508 RTMQSDMDHLGLTPNDNYKLALKALGQCIFFIHKCKLEPKVLPMARYQLYVPPDQLADAK----P 568
Fly 569 AVASTL-RRSHMVLDATTLSNLRII---GEEHSLLSTLDHCCTKFGKRLLHHWLCAPSCDVSVIK 629
Fly 630 ERQDAIGELIRMPTE----LQEVRALLAPMPDFERNLAQIHLFGN----------KQIKQ-MDHP 679
Fly 680 DSRAILFEEKLYNKQKLQGFMAVL--KGFNDLTKLPTMFHQCKTTLLKR-ITQLPESGGSFPDLS 741
Fly 742 KELQYFATAFDHDAAAKTGVIAPQAGMDAEYDAAMDSIGEVEKRLK-TYLVEQERHFGCRITYFG 805
Fly 806 SDKKRYQLDVPESHASKANKSYTLEGQTKGKKPSRRYTTAETRALLKDMQHAEDTRNMVLKDLA- 869
Fly 870 --RRLFEKFSNHYDQWKQC------IDCVANLDVLGSLAEYA------GQQMVICVPELVSDADQ 920
Fly 921 PFIQLEEGYHPCANASTYIPNGLELGTASEAPLSLLTGPNMGGKSTLMREVGLLVIMAQIGAHIP 985
Fly 986 AASCRLSLVDRIFTRLGAQDDILAGHSTFLVELNETSLILKHATCHSLVLLDELGRGTATYDGTA 1050
Fly 1051 IAASVVNFLANLK-C-RTLFSTHY-------HNLIDFFHNDKRITLGHMACMVENEDNADPTQET 1106
Fly 1107 VTFLYKYTAGACPKSYGFNAAKLAGMPQGIIKRAYELSKKVEAIALQRKITAKIVAATAGNEDTK 1171
Fly 1172 KEKINALKDLLK 1183 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Msh6 | NP_648755.1 | MttA_Hcf106 | <44..156 | CDD:294511 | 17/73 (23%) |
MutS | 261..1186 | CDD:223327 | 253/1000 (25%) | ||
MutS_I | 263..375 | CDD:279898 | 32/134 (24%) | ||
MutS_II | 391..508 | CDD:282973 | 18/119 (15%) | ||
MutS_III | 584..>667 | CDD:282977 | 32/89 (36%) | ||
MutS_IV | 767..859 | CDD:282975 | 19/92 (21%) | ||
ABC_MSH6_euk | 924..1140 | CDD:213253 | 86/224 (38%) | ||
MSH3 | NP_010016.2 | MutS | 127..1015 | CDD:223327 | 254/1021 (25%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0249 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG53698 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.820 |