DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FucTA and Fut11

DIOPT Version :9

Sequence 1:NP_001261872.1 Gene:FucTA / 39653 FlyBaseID:FBgn0036485 Length:503 Species:Drosophila melanogaster
Sequence 2:NP_775430.2 Gene:Fut11 / 286971 RGDID:628731 Length:494 Species:Rattus norvegicus


Alignment Length:277 Identity:72/277 - (25%)
Similarity:118/277 - (42%) Gaps:33/277 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   197 KAKCPVDTCELTANRDLASTAD-----MILYKDHYIPTGIRRPSNSKQVSMLYYLECPY------ 250
            :.:|.:..|  .|:||..:.||     ::.|...:.......|..:.|...|.:.|.|.      
  Rat    96 RIECALGAC--VASRDRRARADPRTRALLFYGTDFRAADAPLPRLAHQSWALLHEESPLNNFLLS 158

  Fly   251 HTQNVKVPDAINWTATYRRDSTIVAPYEKW----QYYDTKVQQQEQDINYSVNKTKKVAWFVSNC 311
            |...:::   .|.|||:.|.|....|.: |    .|.........:...:.......:.:..|:|
  Rat   159 HGPGIRL---FNLTATFSRHSDYPLPLQ-WLPGAAYLRRPAPPLRERAEWRRRGYAPLLYLQSHC 219

  Fly   312 GARNGRLQYAHELQKYIEVDIYGACGNFK----------CSRSTADKCFEILDNDYKFYLAFENS 366
            ...:.|.:|..||.:||.||.||.|...:          .:.:|.|.......:.|||:||.||:
  Rat   220 DVPSDRDRYVRELMRYIPVDSYGKCLQNREPPTVRLQDTATATTEDPELMAFLSRYKFHLAMENA 284

  Fly   367 NCKDYITEKFFVNALNRRVLPIVMGARPEDYEVSAPRRSYIHVDEFSSPKELAEYLRILDHDDEL 431
            .|.||:|||.: ..::...:|:..|: |...:......|.|.:|:|.||::|||::..||.:||.
  Rat   285 ICNDYMTEKLW-RPMHLGAVPVYRGS-PSVRDWMPNNHSVILIDDFESPQKLAEFIDFLDKNDEE 347

  Fly   432 YNSYFKWKGTGEFINTY 448
            |..|..:|..|...|.:
  Rat   348 YMKYLAYKQPGGITNQF 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FucTANP_001261872.1 Glyco_tran_10_N 173..277 CDD:293644 20/90 (22%)
Glyco_transf_10 300..473 CDD:279224 49/159 (31%)
Fut11NP_775430.2 Glyco_tran_10_N <120..181 CDD:293644 13/63 (21%)
Glyco_transf_10 217..356 CDD:279224 46/140 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2619
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D551308at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X114
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

Return to query results.
Submit another query.