DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pex3 and PEX3

DIOPT Version :9

Sequence 1:NP_001261871.1 Gene:Pex3 / 39652 FlyBaseID:FBgn0036484 Length:385 Species:Drosophila melanogaster
Sequence 2:NP_010616.3 Gene:PEX3 / 851929 SGDID:S000002737 Length:441 Species:Saccharomyces cerevisiae


Alignment Length:428 Identity:83/428 - (19%)
Similarity:157/428 - (36%) Gaps:118/428 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 RLQDFLSRHRRKFIV--TGV----LVGGTI--FAARY---AQRRFVE--FQEKQAREFFERTRRT 55
            |.:..|.|||.|.::  ||:    ..|..:  |..|:   .|.|..|  |.::|.:..||:|:  
Yeast     6 RSRSLLQRHRGKVLISLTGIAALFTTGSVVVFFVKRWLYKQQLRITEQHFIKEQIKRRFEQTQ-- 68

  Fly    56 THFESTEKTCNQVILGMGEEMCQAVLRE--CSTDELLEQLRQNP-----------------KNKL 101
               |.:..|..:::     .:.:.||.|  .:.|.::.||:...                 |:|.
Yeast    69 ---EDSLYTIYELL-----PVWRMVLNENDLNLDSIVTQLKDQKNQLTRAKSSESRESSPLKSKA 125

  Fly   102 ELWEDMKIVAFTRLATYVYASSMLVIALRVQLNLLGGYIYRDI---MTEQKQVTDELKQQYLSLI 163
            |||.::::.:..:|.|..|..|.|::..|:|||:|....|.|.   :|.|::..::|:.::.:.:
Yeast   126 ELWNELELKSLIKLVTVTYTVSSLILLTRLQLNILTRNEYLDSAIKLTMQQENCNKLQNRFYNWV 190

  Fly   164 RHFITDSGIRDLAR-----------------YIRTQVI-----------------AVTKTIPLS- 193
            ..:.:|.  .|.|.                 ||..|..                 .:|..|.:. 
Yeast   191 TSWWSDP--EDKADDAMVMAAKKSKKEGQEVYINEQAFLSLSWWILNKGWLSYNEIITNQIEIEF 253

  Fly   194 ------EQLSLSDLEQLFWSLQMAINADTRRDPNSRMSKYLLPSQNP------------------ 234
                  :.|:|.:......::....|:...:..|:.::..|||..:.                  
Yeast   254 DGIHPRDTLTLEEFSSRLTNIFRNTNSQIFQQNNNNLTSILLPKDSSGQEFLLSQTLDADALTSF 318

  Fly   235 -SHSPLLQKMVNETLDLLESEDAVGVCSHNVSRGFVLACDAIAESMG-ETLQHLPQAKVQTQQEQ 297
             |::.:..::|||....:||.....|....::..|    ..|...:| :|:......:...||.|
Yeast   319 HSNTLVFNQLVNELTQCIESTATSIVLESLINESF----HFIMNKVGIKTIAKKKPGQEDQQQYQ 379

  Fly   298 SVKFNQA------GSLGASTSKSQNGLENNNLLNINRV 329
            ...|..:      ..|..:...|.:|..|..|..::.|
Yeast   380 MAVFAMSMKDCCQEMLQTTAGSSHSGSVNEYLATLDSV 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pex3NP_001261871.1 Peroxin-3 11..268 CDD:282706 67/351 (19%)
PEX3NP_010616.3 Peroxin-3 13..430 CDD:398512 81/421 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4444
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2691
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004280
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_103586
Panther 1 1.100 - - LDO PTHR28080
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3683
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.840

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