DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pex3 and pex3

DIOPT Version :9

Sequence 1:NP_001261871.1 Gene:Pex3 / 39652 FlyBaseID:FBgn0036484 Length:385 Species:Drosophila melanogaster
Sequence 2:NP_001039031.1 Gene:pex3 / 733783 XenbaseID:XB-GENE-954958 Length:369 Species:Xenopus tropicalis


Alignment Length:410 Identity:136/410 - (33%)
Similarity:218/410 - (53%) Gaps:73/410 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLSRLQDFLSRHRRKFIVTGVLVGGTIFAARYAQRRFVEFQEKQAREFFERTRRTTHFESTEKTC 65
            ||| :.:||.||::|||..|.:.||.....:||||:..|.||::|.|:..:.||..||||.::||
 Frog     1 MLS-MWNFLKRHKKKFIFVGAVAGGVYLLGKYAQRKIREIQEREAAEYIAQARRQYHFESNQRTC 64

  Fly    66 NQVILGMGEEMCQAVLRECSTDELLEQLRQNPKNKLELWEDMKIVAFTRLATYVYASSMLVIALR 130
            |..:|.|...:.:.::::.:::.|...|:..|.||||:|||:||::|:|....||::.|||:.||
 Frog    65 NMTVLSMLPALREGLMQQLNSESLTSLLKNKPSNKLEIWEDLKIISFSRSIVAVYSTCMLVVLLR 129

  Fly   131 VQLNLLGGYIYRDIMTEQK-----QVTDELKQQYLSLIRHFITDSGIRDLARYIRTQVIAVTKTI 190
            ||||::|||||.|..:..|     |.:.|::|||||.|:|.:.| |:.:|...::..|..|..:.
 Frog   130 VQLNIIGGYIYLDNSSLTKNGTTLQASPEVQQQYLSSIQHLLGD-GLSELITVVKQAVQGVLGSF 193

  Fly   191 PLSEQLSLSDLEQLFWSLQM-------AINADTRRDPNSRMSKYLLP-SQNP---------SHSP 238
            .|....||::|||....::.       ::|.: ..|..|::.:||:| .:||         ....
 Frog   194 SLKHCFSLTELEQKIKEIRSLVEKKKGSLNGE-ESDSKSKLCQYLMPDEENPLTTQAYGLTEKDV 257

  Fly   239 LLQKMVNETLDLLESEDAVGVCSHNVSRGFVLACDAIAESMGETLQHLPQAKVQTQQEQSVKFNQ 303
            |..:::|||.|:|||||...|.:..:||||....|:.||....|.:.:.|               
 Frog   258 LTIRLLNETRDMLESEDFKTVLNSCLSRGFGRLLDSTAEFFRPTDREMNQ--------------- 307

  Fly   304 AGSLGASTSKSQNGLENNNLLNINRVLLALAKLIPIISGLTSRGFDTTSRPHNLPTQLLTFYV-- 366
                            :|.|.:|:   |.|||:||||:|          :.|::.:::...:|  
 Frog   308 ----------------DNTLHSIS---LPLAKIIPIING----------QIHSICSEMPNHFVQD 343

  Fly   367 --VAEKTKTLGANVYESFSS 384
              :.|:.|...|||||:||:
 Frog   344 LLLMEQVKNFAANVYEAFST 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pex3NP_001261871.1 Peroxin-3 11..268 CDD:282706 101/278 (36%)
pex3NP_001039031.1 Peroxin-3 10..358 CDD:398512 126/393 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 77 1.000 Domainoid score I8731
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H2691
Inparanoid 1 1.050 206 1.000 Inparanoid score I3619
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D381303at33208
OrthoFinder 1 1.000 - - FOG0004280
OrthoInspector 1 1.000 - - oto103029
Panther 1 1.100 - - LDO PTHR28080
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3683
SonicParanoid 1 1.000 - - X4649
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.190

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