DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdi and AT1G07700

DIOPT Version :9

Sequence 1:NP_001287070.1 Gene:Pdi / 39651 FlyBaseID:FBgn0286818 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_973781.1 Gene:AT1G07700 / 837283 AraportID:AT1G07700 Length:217 Species:Arabidopsis thaliana


Alignment Length:116 Identity:31/116 - (26%)
Similarity:58/116 - (50%) Gaps:8/116 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 EVKVEEGVLVATVDNFKQLIADNEFVLVEFYAPWCGHCKALAPEYAKAAQQLAEKESPIKLAKVD 86
            |.|.:: .|::.::..|:   .|..|:|:||...||.||.:...::|..:|..::|:|:...|.:
plant   102 EFKTDD-ELLSVLEKSKE---TNSLVVVDFYRTACGSCKYIEQGFSKLCKQSGDQEAPVIFLKHN 162

  Fly    87 ATVE----GELAEQYAVRGYPTLKFFRSGSPVEYSGGRQAADIIAWVTKKT 133
            ...|    .|:||:..::..|...|:::|..:|....|....|.|.:.|.|
plant   163 VVDEYDEQSEVAERLRIKAVPLFHFYKNGVLLESFATRDKERIDAAILKYT 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdiNP_001287070.1 ER_PDI_fam 27..474 CDD:273457 29/111 (26%)
pdi_dom 33..133 CDD:273454 27/103 (26%)
PDI_b_family 137..231 CDD:239279
PDI_b'_family 244..347 CDD:239280
PDI_a_PDI_a'_C 368..469 CDD:239293
AT1G07700NP_973781.1 TRX_family 107..209 CDD:239245 27/105 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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