DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdi and LOC685171

DIOPT Version :9

Sequence 1:NP_001287070.1 Gene:Pdi / 39651 FlyBaseID:FBgn0286818 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_001102929.1 Gene:LOC685171 / 685171 RGDID:1597712 Length:139 Species:Rattus norvegicus


Alignment Length:93 Identity:31/93 - (33%)
Similarity:44/93 - (47%) Gaps:19/93 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 LAPEYAKAAQQLAEKESPIKLAKVDATVEGELAEQYAVRGYPTLKFFRSG--SPVEYSGGRQAAD 124
            |.||:.|||..|.:    :|:..|||.....|.:||.|:|:||:|.|.:.  .|..|.|||    
  Rat     2 LTPEWKKAATVLRD----VKVRAVDAGRHQSLGDQYGVQGFPTIKIFGASKTKPEYYQGGR---- 58

  Fly   125 IIAWVTKKTGPPAKDLTSVADAEQFLKD 152
                    |.....|: :::...|.|||
  Rat    59 --------TREATVDV-ALSALHQLLKD 77

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdiNP_001287070.1 ER_PDI_fam 27..474 CDD:273457 31/93 (33%)
pdi_dom 33..133 CDD:273454 25/72 (35%)
PDI_b_family 137..231 CDD:239279 5/16 (31%)
PDI_b'_family 244..347 CDD:239280
PDI_a_PDI_a'_C 368..469 CDD:239293
LOC685171NP_001102929.1 Thioredoxin_like <2..68 CDD:294274 27/82 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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