DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdi and Tmx4

DIOPT Version :10

Sequence 1:NP_524079.1 Gene:Pdi / 39651 FlyBaseID:FBgn0286818 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_083424.1 Gene:Tmx4 / 52837 MGIID:106558 Length:335 Species:Mus musculus


Alignment Length:145 Identity:41/145 - (28%)
Similarity:66/145 - (45%) Gaps:16/145 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 CALFLAASYVAASA-----EAEVKVEEG-VLVATVDNFKQLIADNEFVLVEFYAPWCGHCKALAP 64
            |...|.|:::||:|     :|.:..||. |...|..|: .|:.:.|::| :||||||..|:....
Mouse     6 CVPVLLAAWLAAAAAEGLEQAALPAEESRVQPMTASNW-TLVMEGEWML-KFYAPWCPSCQQTDS 68

  Fly    65 E---YAKAAQQLAEKESPIKLAKVDATVEGELAEQYAVRGYPTLKFFRSGSPVEYSGGRQAADII 126
            |   :||..:.|     .|.:.|||...|..|:.::.|...|.....:.|....|.|.....|:.
Mouse    69 EWETFAKNGETL-----QISVGKVDVIQEPGLSGRFFVTTLPAFFHAKDGIFRRYRGPGIYEDLQ 128

  Fly   127 AWVTKKTGPPAKDLT 141
            .::.:|.....:.||
Mouse   129 NYILEKKWQSVEPLT 143

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdiNP_524079.1 ER_PDI_fam 27..474 CDD:273457 33/119 (28%)
Tmx4NP_083424.1 Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold 33..133 CDD:469754 29/106 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 222..316
Blue background indicates that the domain is not in the aligned region.

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