DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdi and pdia8

DIOPT Version :9

Sequence 1:NP_001287070.1 Gene:Pdi / 39651 FlyBaseID:FBgn0286818 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_001003517.1 Gene:pdia8 / 445123 ZFINID:ZDB-GENE-040801-20 Length:493 Species:Danio rerio


Alignment Length:493 Identity:154/493 - (31%)
Similarity:250/493 - (50%) Gaps:46/493 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKFLICALFLAASYVAASAEAEVKVEEGVLVATVDNFKQLIADNEFVLVEFYAPWCGHCKALAPE 65
            ::.|:|.|       ..|..:..:....||..|..:|..|..::|.:||:||||||||||.||||
Zfish     6 LRGLLCIL-------VCSLSSSAREHSDVLKLTDADFDYLAPEHETLLVKFYAPWCGHCKKLAPE 63

  Fly    66 YAKAAQQLAEKESPIKLAKVDATVEGELAEQYAVRGYPTLKFFRSG-SPVEYSGGRQAADIIAWV 129
            :..||.:|   :..:.|||||.|...|:.:.|.|.||||||.||:| ....|.|.|.|..|:.::
Zfish    64 FESAASRL---KGTVTLAKVDCTANTEICKHYGVNGYPTLKIFRNGQESSSYDGPRSADGIVDYM 125

  Fly   130 TKKTGPPAKDLTSVADAEQFLKDNEIAIIGFFKDLESEEAKTFTKVANAL-DSFVFGVSSNADVI 193
            .|:.||.:..|.|..|.|:|:...:.:::|.|...:|.:...|.|.|:.: :||.|..:::..:.
Zfish   126 KKQAGPDSVLLHSELDLEKFINHFDASVVGLFSGTDSSQLAEFLKGASLMRESFRFAHTTDLQLG 190

  Fly   194 AKYEAKDNGVVLFK------PFDDKKSVFEGELNEENLKKFAQVQSL---PLIVDFNHESASKIF 249
            .||......::||:      .|::......|.|:...|::|.:....   |.:...|.|...|  
Zfish   191 QKYGVTHESILLFRAPRLSSKFEESVVPHTGSLSVTGLRRFIRDNIFGLCPHMTKDNKEVLRK-- 253

  Fly   250 GGSIKSHLLFFVSREGGHIEK----YVDPLKEIAKKYRDDILFVTISSDEEDHTRIFEFFGMNK- 309
                :..|..:...:..|..|    :.:.:.::|.|:....:..::::..:....:.|.||::. 
Zfish   254 ----RDLLTAYYDLDYLHNPKGSNYWRNRVLKVATKFSSQGMLFSVANRNDFMEELEEEFGLSAS 314

  Fly   310 --EEVPTIRLIKLEEDMAKYK-PESDDLSAETIEAFLKKFLDGKLKQHLLSQELPEDWDKNPVKV 371
              .|:|.:.:.....|  ||. .|......:::|:||:.:..|:||:::.|:.:|. .:...|||
Zfish   315 DGNELPFVTIRTRTGD--KYSMREEFTRDGKSLESFLEDYFAGRLKRYVKSEPVPA-INNGVVKV 376

  Fly   372 LVSSNFESVALDKSKSVLVEFYAPWCGHCKQLAPIYDQLAEKYKDNEDIVIAKMDSTANELES-I 435
            :|:..||.:..|..|.||:|||||||||||:|.|.|..|.|....:.:|||||||:|.|::.: .
Zfish   377 VVADTFEEIVNDPEKDVLIEFYAPWCGHCKKLEPKYTALGEMLYSDPNIVIAKMDATVNDVPAGY 441

  Fly   436 KISSFPTIKYF----RKEDNKVIDFNLDRTLDDFVKFL 469
            .:..|||| ||    ||.:.|  .:...|.:.|||.||
Zfish   442 DVQGFPTI-YFAAAGRKSEPK--RYEGAREVKDFVNFL 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdiNP_001287070.1 ER_PDI_fam 27..474 CDD:273457 150/467 (32%)
pdi_dom 33..133 CDD:273454 47/100 (47%)
PDI_b_family 137..231 CDD:239279 23/100 (23%)
PDI_b'_family 244..347 CDD:239280 18/110 (16%)
PDI_a_PDI_a'_C 368..469 CDD:239293 48/105 (46%)
pdia8NP_001003517.1 ER_PDI_fam 25..484 CDD:273457 150/467 (32%)
pdi_dom 30..129 CDD:273454 47/101 (47%)
PDI_b_ERp57 132..236 CDD:239367 23/103 (22%)
PDI_b'_ERp72_ERp57 240..353 CDD:239371 21/120 (18%)
PDI_a_PDI_a'_C 373..476 CDD:239293 48/105 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170591991
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0190
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53639
OrthoDB 1 1.010 - - D222522at33208
OrthoFinder 1 1.000 - - FOG0000292
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100478
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X241
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
87.660

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