DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pdi and txndc5

DIOPT Version :10

Sequence 1:NP_524079.1 Gene:Pdi / 39651 FlyBaseID:FBgn0286818 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_998181.2 Gene:txndc5 / 406289 ZFINID:ZDB-GENE-040426-1951 Length:403 Species:Danio rerio


Alignment Length:472 Identity:118/472 - (25%)
Similarity:187/472 - (39%) Gaps:128/472 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 FLICALFLAASYVAASAEAEVKVEEGVL-VATVDNFKQLIAD-NEFVLVEFYAPWCGHCKALAPE 65
            ||...::||......|.:.:.:.:|... ..||:.|...|:. ..||:  |:|||||||:.|...
Zfish     4 FLTSFIYLALLCSRLSCDNDTEEDEHAKHTYTVEMFNDAISTAPHFVM--FFAPWCGHCQRLQGT 66

  Fly    66 YAKAAQQLAEKES-PIKLAKVDATVEGELAE-QYAVRGYPTLKFFR-SGSPVEYSGGRQAADIIA 127
            :.:.|.:....|: |..:.|||.|.:.:... ::.:|||||||.|: ....|:|.|.|....:..
Zfish    67 WNELADKYNSMEAPPAYVVKVDCTKDTKFCSIEHGIRGYPTLKLFKPEQEAVKYQGPRDLQALEN 131

  Fly   128 WVTKKTGPPAKDLTSVADAEQFLKDNEIAIIGFFKDLESEEAKTFTKVANALDSFVFGVSSNADV 192
            |:.|......::..|                      |.|..|.                     
Zfish   132 WMLKTLQEEPEEPQS----------------------EPEPPKV--------------------- 153

  Fly   193 IAKYEAKDNGVVLFKPFDDKKSVFEGELNEENLKKFAQVQSLPLIVDFNHESASKIFGGSIKSHL 257
                           | :.|:.::  ||...|.|                   |.|..|   ||.
Zfish   154 ---------------P-EPKQGLY--ELTATNFK-------------------SHIAKG---SHF 178

  Fly   258 LFFVSREGGHIEKYVDPLKEIAKKYRDDILFVTISSDEEDHTRIFEFFGMNK-EEVPTIRLIKLE 321
            :.|.:...||.:......:::|..:...   .:|...:.|.|:.:|....|: ...||:......
Zfish   179 VKFFAPWCGHCKAMAPTWEQLASSFEHS---DSIKISKVDCTQHYEVCSDNQVRGYPTLLFFTDG 240

  Fly   322 EDMAKYKPESDDLSAETIEAFLKKFLDGKLK------------QHLLSQEL-----PEDWDKNPV 369
            |.:.:||.:.|      :::| |:|:|..:|            :|  :.|:     ||..:.| |
Zfish   241 EKIDQYKGKRD------LDSF-KEFVDNHVKAAESKDEPEKEEEH--THEIPPSAEPEKQESN-V 295

  Fly   370 KVLVSSNF-ESVALDKSKSVLVEFYAPWCGHCKQLAPIYDQLAEK-YKDNEDIVIAKMDSTANE- 431
            .||..||| |:||...|   .::||||||||||.|||.:|.|::| :....|:.|||:|.|... 
Zfish   296 LVLTESNFDETVAKGLS---FIKFYAPWCGHCKNLAPTWDDLSQKEFPGLTDVKIAKVDCTVERT 357

  Fly   432 -LESIKISSFPTIKYFR 447
             .....:..:||:..||
Zfish   358 LCNRFSVRGYPTLLMFR 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdiNP_524079.1 ER_PDI_fam 27..474 CDD:273457 113/448 (25%)
txndc5NP_998181.2 Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold 34..133 CDD:469754 34/100 (34%)
PDI_a_ERp46 159..259 CDD:239303 26/133 (20%)
PDI_a_ERp46 294..395 CDD:239303 37/85 (44%)

Return to query results.
Submit another query.