DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdi and pdia7

DIOPT Version :9

Sequence 1:NP_001287070.1 Gene:Pdi / 39651 FlyBaseID:FBgn0286818 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_998070.1 Gene:pdia7 / 405841 ZFINID:ZDB-GENE-040426-2238 Length:488 Species:Danio rerio


Alignment Length:495 Identity:165/495 - (33%)
Similarity:261/495 - (52%) Gaps:57/495 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 FLICALFLAASYVAASAEAEVKVEEG--VLVATVDNFKQLIADNEFVLVEFYAPWCGHCKALAPE 65
            |:|||:.            .|.:.||  ||.....:|.:....::.:||||:|||||||:.||||
Zfish     6 FIICAVL------------TVWLAEGSDVLELGDSDFDRSAGMHDTLLVEFFAPWCGHCQRLAPE 58

  Fly    66 YAKAAQQLAEKESPIKLAKVDATVEGELAEQYAVRGYPTLKFFRSGSPV-EYSGGRQAADIIAWV 129
            |..||.:|   :..:.|||||.||..|..|::.|.||||||.||:|... .|.|.|.|..|::::
Zfish    59 YEAAATKL---KGTLALAKVDCTVNSETCERFGVNGYPTLKIFRNGEESGAYDGPRTADGIVSYM 120

  Fly   130 TKKTGPPAKDLTSVADAEQFLKDNEIAIIGFFKDLESEEAKTFTKVANAL-DSFVFGVSSNADVI 193
            .|:.||.:..|...||.:.|:.:.|.:::|||...:|.:...|.|.::|| ||:.|..|::....
Zfish   121 KKQAGPSSVALLKEADLDGFVDNYEASVVGFFSGEDSAQLAEFLKASSALRDSYRFAHSTDVGAG 185

  Fly   194 AKYEAKDNGVVLFKP------FDDKKSVFEGELNEENLKKFAQVQSLPLIVDFNHESASKIFGGS 252
            .||......|:||:|      |:|....:...|:..:|.||.:...|.|......|:...:    
Zfish   186 LKYGVDGECVLLFRPPRLSSKFEDNVVKYTEHLSVSSLHKFVKDNILGLCPHMTMENRDTV---- 246

  Fly   253 IKSHLL--FFVSREGGHIEKYVDP---------LKEIAKKYRDDILFVTISSDEEDHTRIFEFFG 306
            .:|.||  ||      :::...:|         :.::|.:::|..|...::..:|....:.|.||
Zfish   247 RESDLLTAFF------NVDYLRNPKGTNYWRNRIMKVATQFQDRGLTFAVADRQEFQDELEEEFG 305

  Fly   307 MNKEEVPTIRLIKLEEDMA-KYKPESD-DLSAETIEAFLKKFLDGKLKQHLLSQELPEDWDKNPV 369
            ::..|...:.|:.:..... ||..:.: ....:::|.||:.:...:||:::.|:.:||..| .||
Zfish   306 VSSSEGGDVPLVTIRTRAGQKYSMQEEFTRDGKSLEKFLEDYFAKRLKRYVKSEPIPESND-GPV 369

  Fly   370 KVLVSSNFESVALDKSKSVLVEFYAPWCGHCKQLAPIYDQLAEKYKDNEDIVIAKMDSTANEL-E 433
            ||||:..|:::..|..|.||||||||||||||.|.|.|.:|.||...|.:|||||||:|||:: .
Zfish   370 KVLVADTFDAIVNDPEKDVLVEFYAPWCGHCKNLEPKYKELGEKLSGNPNIVIAKMDATANDVPP 434

  Fly   434 SIKISSFPTIKYF----RKEDNKVIDFNLDRTLDDFVKFL 469
            :..:..|||| ||    :|:..:  .:...|.::||:.:|
Zfish   435 NYDVQGFPTI-YFVPSGQKDQPR--RYEGGREVNDFITYL 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdiNP_001287070.1 ER_PDI_fam 27..474 CDD:273457 160/471 (34%)
pdi_dom 33..133 CDD:273454 45/100 (45%)
PDI_b_family 137..231 CDD:239279 29/100 (29%)
PDI_b'_family 244..347 CDD:239280 20/115 (17%)
PDI_a_PDI_a'_C 368..469 CDD:239293 50/105 (48%)
pdia7NP_998070.1 ER_PDI_fam 20..483 CDD:273457 158/469 (34%)
Thioredoxin_like 25..124 CDD:294274 45/101 (45%)
PDI_b_ERp57 127..231 CDD:239367 29/103 (28%)
PDI_b'_ERp72_ERp57 235..348 CDD:239371 21/122 (17%)
PDI_a_PDI_a'_C 368..471 CDD:239293 50/105 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170591995
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0190
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53639
OrthoDB 1 1.010 - - D222522at33208
OrthoFinder 1 1.000 - - FOG0000292
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100478
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X241
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
98.660

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