DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pdi and CG14221

DIOPT Version :9

Sequence 1:NP_001287070.1 Gene:Pdi / 39651 FlyBaseID:FBgn0286818 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_001259713.1 Gene:CG14221 / 32961 FlyBaseID:FBgn0031042 Length:586 Species:Drosophila melanogaster


Alignment Length:561 Identity:104/561 - (18%)
Similarity:193/561 - (34%) Gaps:153/561 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 VATVDNFKQLIADNEFVLVEFYAPWCGHCKALAPEYAKAAQQLAEKESPIKLAKVDATVEGELA- 94
            :|:.:.|::.:..:..::::.|:.|||.|..:.....|...:|......:.:.|.     |.:: 
  Fly    14 LASDEEFEKFLQRSGLLVLDIYSEWCGPCLGMVGSLRKIKLELGGDNLQLAICKA-----GSISY 73

  Fly    95 -EQYAVRGYPTLKFFRSGSPVEYSGGRQAADIIAWVTK-------KTGPPAKDLTSVADAEQFLK 151
             :::..:..||..|..||..:....|.....::|.:|:       |....:.::|.:...|  |:
  Fly    74 LKRFNKKSEPTWMFVTSGKAINIMFGTDVPKLVAMITRMLQSTMAKETHLSYEITELQPIE--LE 136

  Fly   152 DNEI--AIIGFFKDLESEEAK----------TFTKVANALD--SFVFGVSSNADVI--------- 193
            ..|:  ..:...:::|..|::          |...:||..|  ..|||...|.|:.         
  Fly   137 QLEVRNKALRLAEEIELAESRRKRLEYLHSVTDCIMANLPDIGITVFGPQVNRDMFKKLSEPADP 201

  Fly   194 AKYEAKDNGVVLFKPFDD-----------KKSVFEGELNEENLKKFAQVQSL----PLIV-DFNH 242
            .|.:.||..|....|.|.           ...|.|...::|.|..|.:|..:    |.:: .:.|
  Fly   202 LKIQCKDRKVFTILPSDIATVNFAAENPLSPEVIEQLYDKELLMCFWKVDEVLGTPPTVLRQYAH 266

  Fly   243 ESASKIFGGSIKSHLLFFVSREGGHIEKYVDPLKEIAKKYRDDILFVTIS-SDEEDHTRIFEFFG 306
            |...:    :||....|  :.|...:...:.||:            ||:. ||.|..|.      
  Fly   267 ELTKE----TIKPPDEF--NEEEITVPPMIVPLE------------VTVEISDPEPSTE------ 307

  Fly   307 MNKEEVP-TIRLIKLEEDMAKYKPESDDLSAE--------------------------------T 338
             |.:..| .:.|.::..:......|..:..||                                |
  Fly   308 -NSQVQPDAVHLAEIRSENVAEAEEETETEAEAGAAPEAKTAPVAAKRTKTIRIPPIWVPSDQRT 371

  Fly   339 IEAFLKKFLDGKLKQHLLSQELPEDWDKNPVKVLVSSNFESVALDKSKSVLVEFYAPWCGHCKQL 403
            ..|.:..:...:....|....:||.    |..|::...::.    |..::|:|       .|::.
  Fly   372 HAALIYTYFRAQTTTFLPPDPVPEP----PHIVMIFDAYKK----KDLAILLE-------TCRED 421

  Fly   404 APIYDQLAEKYKDNEDIVIAKMDSTANELESIKISSF-PTIKYFRKEDNKVIDFNLDRTLDDFVK 467
            .|:|.     :.:.::.:.|:.  .||.:|......: ||.|...|. |||....:...:.....
  Fly   422 IPLYG-----FFNGDNPLTAQF--IANSVEKYNAKPYVPTDKIVLKV-NKVNSPTIPTLMAYGPS 478

  Fly   468 FLDANGEVADSEPVE---------ETEEEE------EAPKK 493
            ::.||..|...|..:         ..||||      |.|||
  Fly   479 YVSANSVVGHQEATQFFPANYKSALQEEEELHAVKTEKPKK 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdiNP_001287070.1 ER_PDI_fam 27..474 CDD:273457 94/525 (18%)
pdi_dom 33..133 CDD:273454 18/108 (17%)
PDI_b_family 137..231 CDD:239279 26/127 (20%)
PDI_b'_family 244..347 CDD:239280 20/136 (15%)
PDI_a_PDI_a'_C 368..469 CDD:239293 19/101 (19%)
CG14221NP_001259713.1 Thioredoxin_like 11..111 CDD:294274 18/101 (18%)
DUF4746 233..508 CDD:292550 57/322 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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