DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pdi and dhd

DIOPT Version :9

Sequence 1:NP_001287070.1 Gene:Pdi / 39651 FlyBaseID:FBgn0286818 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_001284882.1 Gene:dhd / 31444 FlyBaseID:FBgn0011761 Length:107 Species:Drosophila melanogaster


Alignment Length:82 Identity:30/82 - (36%)
Similarity:45/82 - (54%) Gaps:7/82 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 VATVDNFKQLI--ADNEFVLVEFYAPWCGHCKALAPEYAKAAQQLAEK-ESPIKLAKVDATVEGE 92
            |.|::::.:.|  ||::.::::|||.|||.||    |.....:.||.| .|...:.|:|.....|
  Fly     4 VRTMNDYHKRIEAADDKLIVLDFYATWCGPCK----EMESTVKSLARKYSSKAVVLKIDVDKFEE 64

  Fly    93 LAEQYAVRGYPTLKFFR 109
            |.|:|.||..||..|.|
  Fly    65 LTERYKVRSMPTFVFLR 81

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdiNP_001287070.1 ER_PDI_fam 27..474 CDD:273457 30/82 (37%)
pdi_dom 33..133 CDD:273454 29/80 (36%)
PDI_b_family 137..231 CDD:239279
PDI_b'_family 244..347 CDD:239280
PDI_a_PDI_a'_C 368..469 CDD:239293
dhdNP_001284882.1 TRX_family 17..93 CDD:239245 27/69 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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