DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdi and C14B9.2

DIOPT Version :9

Sequence 1:NP_001287070.1 Gene:Pdi / 39651 FlyBaseID:FBgn0286818 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_498775.2 Gene:C14B9.2 / 176147 WormBaseID:WBGene00015752 Length:618 Species:Caenorhabditis elegans


Alignment Length:494 Identity:183/494 - (37%)
Similarity:269/494 - (54%) Gaps:46/494 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 EGVLVATVDNFKQLIADNEFVLVEFYAPWCGHCKALAPEYAKAAQQLAEKESPIKLAKVDATVEG 91
            |.|:..|.:||...|::||.||||||||||||||.|||||.||||:|..:.|.:||.|||||:|.
 Worm   147 EEVVTLTTENFDDFISNNELVLVEFYAPWCGHCKKLAPEYEKAAQKLKAQGSKVKLGKVDATIEK 211

  Fly    92 ELAEQYAVRGYPTLKFFRSGSPVEYSGGRQAADIIAWVTKKTGPPAKDLTSVADAEQFLKDNEIA 156
            :|..:|.|.||||:|..|:|...:|:|.|:||.||.::|.::.|.||.|..:.|.|:|:..:::.
 Worm   212 DLGTKYGVSGYPTMKIIRNGRRFDYNGPREAAGIIKYMTDQSKPAAKKLPKLKDVERFMSKDDVT 276

  Fly   157 IIGFFKDLESEEAKTFTKVANAL-DSF-VFGVSSNADVIAKYEAKDNGVVLFKP------FDDKK 213
            |||||...:|...:.|:..|..| :.| ..|.:|:.....|::||.|.:::|.|      |:.|.
 Worm   277 IIGFFATEDSTAFEAFSDSAEMLREEFKTMGHTSDPAAFKKWDAKPNDIIIFYPSLFHSKFEPKS 341

  Fly   214 SVF-EGELNEENLKKFAQVQSLPLIVDFNHESASKIFGGSIKSHLL-------FFVS-REGGHIE 269
            ..: :.....|:|..|.:..|.||:.....::|:..:   .|..|:       |.|. |||.  |
 Worm   342 RTYNKAAATSEDLLAFFREHSAPLVGKMTKKNAATRY---TKKPLVVVYYNADFSVQYREGS--E 401

  Fly   270 KYVDPLKEIAKKYRDDILFVTISSDEEDHTRIFEFFGMNKEEVPTIRLIKLEEDMAKYKPESDDL 334
            .:...:..||:||:.|.....: :|||:..:..|..|:....:.. .::....|..||....|:.
 Worm   402 YWRSKVLNIAQKYQKDKYKFAV-ADEEEFAKELEELGLGDSGLEH-NVVVFGYDGKKYPMNPDEF 464

  Fly   335 SA---ETIEAFLKKFLDGKLKQHLLSQELPEDWDKNPVKVLVSSNFESVALDKSKSVLVEFYAPW 396
            ..   |.:|||:|:...||.|.|:.|...|:| ||.|||.:|.|||:.:..|:||.||:||||||
 Worm   465 DGELDENLEAFMKQISSGKAKAHVKSAPAPKD-DKGPVKTVVGSNFDKIVNDESKDVLIEFYAPW 528

  Fly   397 CGHCKQLAPIYDQLAEKYKDNE-DIVIAKMDSTANELES-IKISSFPTIKYFRKEDNK--VIDFN 457
            |||||.....|.:||:..|..: ::|:||||:|.|:..| ..:..|||| ||.....|  .|.::
 Worm   529 CGHCKSFESKYVELAQALKKTQPNVVLAKMDATINDAPSQFAVEGFPTI-YFAPAGKKSEPIKYS 592

  Fly   458 LDRTLDDFVKFLDANGEVADSEPVEETEEEEEAPKKDEL 496
            .:|.|:|..||:..:|             .:...|||||
 Worm   593 GNRDLEDLKKFMTKHG-------------VKSFQKKDEL 618

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdiNP_001287070.1 ER_PDI_fam 27..474 CDD:273457 177/470 (38%)
pdi_dom 33..133 CDD:273454 57/99 (58%)
PDI_b_family 137..231 CDD:239279 29/102 (28%)
PDI_b'_family 244..347 CDD:239280 28/113 (25%)
PDI_a_PDI_a'_C 368..469 CDD:239293 47/104 (45%)
C14B9.2NP_498775.2 pdi_dom 41..138 CDD:273454
ER_PDI_fam 147..616 CDD:273457 179/490 (37%)
pdi_dom 152..253 CDD:273454 57/100 (57%)
Thioredoxin_like 256..361 CDD:294274 29/104 (28%)
PDI_b'_ERp72_ERp57 366..476 CDD:239371 26/116 (22%)
PDI_a_PDI_a'_C 500..604 CDD:239293 47/104 (45%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0190
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53639
OrthoDB 1 1.010 - - D222522at33208
OrthoFinder 1 1.000 - - FOG0000292
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2224
SonicParanoid 1 1.000 - - X241
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.860

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