DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdi and Txndc5

DIOPT Version :9

Sequence 1:NP_001287070.1 Gene:Pdi / 39651 FlyBaseID:FBgn0286818 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_001258259.1 Gene:Txndc5 / 100362805 RGDID:2323973 Length:417 Species:Rattus norvegicus


Alignment Length:501 Identity:120/501 - (23%)
Similarity:192/501 - (38%) Gaps:144/501 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LICALFLAASYVAASAEAEVKVEEGV-------LVATVDNFKQLI-ADNEFVLVEFYAPWCGHCK 60
            |...|.|..:...|.|: ||:.:.||       .:.|.|.|...| :...||:  |:|||||||:
  Rat    18 LATLLLLLGARKGARAQ-EVEADSGVEQDPHAKHLYTADMFTHGIQSAAHFVM--FFAPWCGHCQ 79

  Fly    61 ALAPEYAKAAQQLAEK-----ESPIKLAKVDATVEGELAEQYAVRGYPTLKFFRSG-SPVEYSGG 119
            .|.|.:    ..|.:|     ::.:.:||||.|...::.....||||||||||:.| ..|:|.|.
  Rat    80 RLQPTW----NDLGDKYNSMEDAKVYVAKVDCTANSDVCSAQGVRGYPTLKFFKPGQEAVKYQGP 140

  Fly   120 RQAADIIAWVTK------KTGPPAKDLTSVADAEQFLKDNEIAIIGFFKDLESEEAKTFTK---- 174
            |....:..|:.:      .|..|..:.....:.:|.|  .|::...|  :|...:...|.|    
  Rat   141 RDFETLENWMLQTLNEEPATPEPEAEPPRAPELKQGL--YELSANNF--ELHVSQGNHFIKFFAP 201

  Fly   175 -------VANALDSFVFGVSSNADV-IAKYEAKDNGVVLFKPFDDKKSVFEGELNEENLKKFAQV 231
                   :|...:....|:..:..| |.|.:...:..|..:                     .||
  Rat   202 WCGHCKALAPTWEQLALGLEHSETVKIGKVDCTQHYAVCSE---------------------HQV 245

  Fly   232 QSLPLIVDFNHESASKIFGGSIKSHLLFFVSREGGHIEKYVDPLKEIAKKYRDDILFVTISSDEE 296
            :..|.                    ||:|  |:|..:::|                         
  Rat   246 RGYPT--------------------LLWF--RDGKKVDQY------------------------- 263

  Fly   297 DHTRIFEFFGMNKEEVPTIRLIKLEEDMAKYKPESDDLSAETIEAFLKKFLDGKLKQHLLSQELP 361
                      ..|.::.::|      |..:.:.:..:.:.||:|         ..:..:|:.|.|
  Rat   264 ----------KGKRDLESLR------DYVQSQLQGSEAAPETVE---------PSEAPVLAAEPP 303

  Fly   362 EDWDKNPVKVLVSSNFESVALDKSKSVLVEFYAPWCGHCKQLAPIYDQLAEK-YKDNEDIVIAKM 425
              .||..|..|...:||...  ......|:||||||||||.|||.:::|::| :....|:.||::
  Rat   304 --GDKGTVLALTEKSFEDTI--AQGITFVKFYAPWCGHCKNLAPTWEELSKKEFPGLADVTIAEV 364

  Fly   426 DSTANE--LESIKISSFPTIKYFRKEDNKVIDFNLDRTLDDFVKFL 469
            |.||..  .....:..:||:..||..: ||.:.|..|.||....|:
  Rat   365 DCTAERGVCSKYSVRGYPTLLLFRGGE-KVGEHNGGRDLDSLHSFV 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdiNP_001287070.1 ER_PDI_fam 27..474 CDD:273457 113/478 (24%)
pdi_dom 33..133 CDD:273454 39/112 (35%)
PDI_b_family 137..231 CDD:239279 13/105 (12%)
PDI_b'_family 244..347 CDD:239280 12/102 (12%)
PDI_a_PDI_a'_C 368..469 CDD:239293 36/103 (35%)
Txndc5NP_001258259.1 PDI_a_ERp46 47..150 CDD:239303 38/108 (35%)
ER_PDI_fam 52..417 CDD:273457 111/466 (24%)
PDI_a_ERp46 176..276 CDD:239303 24/187 (13%)
PDI_a_ERp46 308..409 CDD:239303 36/103 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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