DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cep135 and tsga10

DIOPT Version :9

Sequence 1:NP_001189108.1 Gene:Cep135 / 39647 FlyBaseID:FBgn0036480 Length:1065 Species:Drosophila melanogaster
Sequence 2:XP_005160173.1 Gene:tsga10 / 768146 ZFINID:ZDB-GENE-061013-482 Length:717 Species:Danio rerio


Alignment Length:705 Identity:165/705 - (23%)
Similarity:319/705 - (45%) Gaps:106/705 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   365 NLNERLNLLTRREEELQATNEKHKKKIQKMQAKILELQKELKDQNKHSNVTLDEEKIRLSSERDF 429
            :.:..|..:.|..:|||...:||::.:.:.||.:                     |: |::|||.
Zfish    30 SFDSELMRVLRERDELQNMLDKHERHLSETQANV---------------------KV-LTAERDK 72

  Fly   430 FQKEYLRLMSKTGSESEIAFLHAQIKSKDEELKALRSELFHGGKQQFSPQKSVQYETLPPPTASS 494
            .:..|.:      ::.|||.|..::         ::|:...|.|                  :.|
Zfish    73 TRMHYQQ------AQEEIAALRREV---------MKSKAARGAK------------------SCS 104

  Fly   495 ITSTVTSNTSDCVQAAIARVERERDCARTELERVRCERDTLREKQLSTVQLHADELQALRLRNEE 559
            :|:          |:.:.|||.|||.|.::|.|:..|||:|||:...:.:....|...|....|:
Zfish   105 VTA----------QSILKRVETERDEAISDLNRMTTERDSLRERLKISQETSISERAHLEQTLED 159

  Fly   560 LNDRLRQMERDNRELNSARLPTETNLVLLKEDLLQMRQRVASMQTEIDQLKTENDQITMLNDQNE 624
            |...:..:|::..|..........|::.|:|::..:.:::::.:.|:.:.:.|...:.:.|:|.|
Zfish   160 LQAAVLTLEQERGEQKCRHAQMRENMMGLEEEVHNLSRKLSASEEELIRCRNECCSLRLSNNQME 224

  Fly   625 RIIADYQSKLLVAERQRQSADVRASTLDSSRESNRSEVTQLRMDLGALRQTYISLEHEKDTLLHQ 689
            ..:::.|.:|.....:.|:|..|..|||...:|...:||.||.:|...|.|...|:.:::||..|
Zfish   225 SSLSENQRRLTNRIGELQNAQERNKTLDEMNDSLVRQVTVLREELNTQRATISQLDQQRNTLQEQ 289

  Fly   690 LDTKTERVYKLEYELKDCKEKRNALEQNVKDLEDQLRKLANRNRQ-------RDSELTETSTESK 747
            ::.|::.:....::|.:.::...:|:...:|||..|..|.:.:|.       ::.||.....:..
Zfish   290 MEKKSDLINTANHQLDENEKTIRSLKLRAEDLETTLIVLCSPSRALRDTISGKERELDVLKRKLS 354

  Fly   748 TLRQQIVALKASRDEAIAENRRLMDKLSDAQVEARTLQKKLTDSELQVANMKQQLHKYVQEVKKA 812
            ...:::..|...:|||..||.:|.|.|..|..|.:||:.||.::.|::.::::::..::.::.:.
Zfish   355 DSEKEMDTLMKVKDEASQENGQLRDDLDRAHQENQTLKFKLDEANLEIEDLQKKVQDHIADISRT 419

  Fly   813 EDLLIQKVSSKFKE-KERDDMLDQYHCLTQGQATLEGNNQSLECEAVEFRRQICELECEVHSLKE 876
            ||||    |:|.:| :|..:...:...|.:   :.|...:..|...:|.|.::.....|:..|||
Zfish   420 EDLL----SAKERECRELQESRRKESILVE---SWEDQARRAETTVIELRLELHNANSEILRLKE 477

  Fly   877 -------QLQLRQCALHDMEVQLTAARASVRCLERELENARDDIRVQKVDLEARKELCDKLDVER 934
                   :||....|......||:.....:..:|.:|..||.:....:.|||..:|||.|||..:
Zfish   478 RADSLENRLQQALSAERSCTSQLSQLNRKMIHMEEDLCQARAEHTQAQADLEKTRELCVKLDASK 542

  Fly   935 SKLNAELNDVNEIRKKLEKQ--CEKLRDELQQSLAINQVTNETTDLMLGRLHNDQQHQEDDDI-R 996
            ..:..||.......:.|:||  .|:|..:..:||.::     |.:..|.|....|:.|.:.:| :
Zfish   543 DAVQRELESCCSEIELLQKQLTSERLSVQTLESLLVS-----TREKELQRQLTSQERQTEIEILK 602

  Fly   997 SKHEM--------DRLQRQLQQTLDQLQEERVRCRHHEELAEKWEQQ--VRDLRR 1041
            .|..|        .|...||:....||:.:....:.|.. .|::|::  |::|||
Zfish   603 DKLSMADSKANSQSREMAQLKTRSCQLEADLEMTKRHLS-TERFERERAVQELRR 656

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cep135NP_001189108.1 Smc <203..963 CDD:224117 143/614 (23%)
DUF342 <302..421 CDD:302792 9/55 (16%)
tsga10XP_005160173.1 COG4913 <16..308 CDD:227250 76/342 (22%)
Smc <174..521 CDD:224117 81/353 (23%)
CALCOCO1 <421..>657 CDD:285171 63/249 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 241 1.000 Domainoid score I2200
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 241 1.000 Inparanoid score I3312
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D139407at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm26335
orthoMCL 1 0.900 - - OOG6_104787
Panther 1 1.100 - - O PTHR23159
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
98.930

Return to query results.
Submit another query.