DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cep135 and tag-278

DIOPT Version :9

Sequence 1:NP_001189108.1 Gene:Cep135 / 39647 FlyBaseID:FBgn0036480 Length:1065 Species:Drosophila melanogaster
Sequence 2:NP_508635.2 Gene:tag-278 / 180658 WormBaseID:WBGene00015356 Length:1163 Species:Caenorhabditis elegans


Alignment Length:972 Identity:199/972 - (20%)
Similarity:406/972 - (41%) Gaps:191/972 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   216 LTAAGEQLEFFKRKVEARNREIRRLNDMLAGGR--PLAALAKDCCYKDVGALSQ----------- 267
            :.|..|::...|:..|||.:..:.|.|.....:  .|..|.|: ..|::..|.|           
 Worm   207 IIALSEEVLGAKKDFEARMKSFQALQDKFEREKEQALEKLRKE-HQKEIQVLEQRFSDTQLLNLE 270

  Fly   268 -----DIDLLQREKSDLMMQVREFQDKMHDAMQRALSSEED-----KIKLQTQLEELKEAALQVE 322
                 :|..|:.|:..|..:.....:.....::||.|..|.     |:....:||.|::....::
 Worm   271 QKYIIEIQRLEEERKSLRTEKERLGETFEMKLRRAQSLYETELTAAKMLYTKELEALRDHEEALK 335

  Fly   323 QQANAEIDAKESELRQLQLELKKKGKDHRLTGGFASNQSD-------KHNLNERLNLLTRREEEL 380
            ::..|..|.....|::|||:.|:..:|      ..|.::|       .||..:.:..||:..:::
 Worm   336 EELLARQDEFHDRLQELQLQSKRSRED------LVSCKNDVTALEKKLHNKEKEVQTLTKELDQV 394

  Fly   381 QA-TNEK-------------HKKKIQKMQ------AKILELQKELKDQNKHSNVTLDEEKIRLSS 425
            :. ||:|             ::||.|:.:      |::|.:.:..|::.:.....|..|...|.:
 Worm   395 KTETNDKIRRLTEVTSEFAEYRKKFQQQEEELRRKARLLTVVEAAKEKLESVISDLQVEVKALKN 459

  Fly   426 ERDFFQKEYLRLMSKTGSESEI---------AFLHAQIKSKDEELKALRSELFHGGKQQFSPQKS 481
            :.:|.:||...|.|::.|::::         |.||:..|.|:...:.....|....:|..|.:.:
 Worm   460 KVEFLEKERENLQSQSESQTQLQSSQVDALEAVLHSVTKEKETTKEHYEGLLLKERQQAESREHA 524

  Fly   482 VQYETLPPPTASSITSTVTSNTSDCVQAAIARVERERDCARTELER-VRCERDTLREKQLSTVQL 545
            ::.|                     ....:..:|.:....:.|||. .|.::|.|||        
 Worm   525 MKKE---------------------FSCKLNELEEQYTSLKEELEESARLDKDELRE-------- 560

  Fly   546 HADELQALRLRNEE---------LNDRLRQMERDNRELNSARLPTETNLVLLKEDLLQMRQRVAS 601
             |.|::...||.|:         |..::...|:|:.....|::..:|:  .|...|.:.|:|:..
 Worm   561 -ASEIEIQALRTEKSILAAEIRVLTQKIEDEEQDDITEQLAKIVEDTS--QLTRTLEEYRERITG 622

  Fly   602 MQTEIDQLKTE-NDQITMLNDQNERIIADYQSKLLVAERQRQSADVRA---------STLDSSRE 656
            ...||..|:.: ..:|:...|:| |::.:...|.|.|.::..:..||.         |..::.:|
 Worm   623 KDAEILNLRKQLEKEISHTEDRN-RLLHENTQKELEAHKETHTETVRVLEAEIDQFKSAFENEQE 686

  Fly   657 SNRSEVTQLRMDLGALRQTYIS----LEH----------EKDTLLHQLDTKTERVYKLEYELKDC 707
            ..:.:..::| :|.|..:|.:|    ::|          :||.||.:|::|.:.:..|:.|:...
 Worm   687 YGKEKSAKIR-ELEAQNKTLLSEMEKVKHVAENLEAFTSDKDNLLEELESKNKNIEHLKQEIAQL 750

  Fly   708 KEKRNALE-QNVKDLEDQLRKLANRNRQRDSELTETSTESKTLRQQIVALKASRDEAIAENRRLM 771
            .||.:..| :...:||..:.:|...|..:..::.:.......:..|:..:|   ||.:.:|..: 
 Worm   751 NEKISTKETEKDSELEKTIAQLEIDNSSKSDQIEKLHLRVNDMLDQMGTIK---DELVKKNEEI- 811

  Fly   772 DKLSDAQVEARTLQKKLTDSELQVANMKQQLHKYVQEVKKAEDLLIQKVSSKFKEKERDDMLDQY 836
             |...|:. |:.|:....:||.::|::.::..|   |::..:..:.:|.:....:.||.:.|:. 
 Worm   812 -KTISAKT-AQLLESNTVESETKLASVTEEREK---EIQSFQTQISEKDNEVLTKAERINELET- 870

  Fly   837 HCLTQGQATLEGNNQSLECEAVEFRRQICELECEV---HSLKEQLQLRQCALHDMEVQLTAARAS 898
             ||.:.:..|.|....|:    :..:|:.|....|   :|::|::..::..:::|..:|      
 Worm   871 -CLKEREVELTGMRTKLD----DMTQQLNEETTVVLFDNSIQEKIDEKEATINEMNERL------ 924

  Fly   899 VRCLERELENARDDIRVQKVDLEARKELCDKL--------------DVERSKLNAELNDVNEIRK 949
             :..|.|:....:::.:||...|.|.|...||              ..|:|.:.||:..|.:..|
 Worm   925 -KSRENEIAKLHEEMYMQKTQNEKRNEEQSKLFQELMFEKEQLEAEKAEQSHIEAEVEQVFQADK 988

  Fly   950 --KLEKQCEKLRDELQ-QSLAINQVTNETTDLMLGRLHNDQQHQEDDDIRSKHEMDRLQRQLQQT 1011
              |.::|.|.|.:.|| ::..|.|:.:..||......|..::.    .|.|.........|::..
 Worm   989 ESKWKEQIEDLENALQRKNELIQQLQDRQTDESTSEPHTKKRM----SITSHGVFQNFVSQMKDK 1049

  Fly  1012 LDQLQEERVRC---RHHEELAEKWEQQVRDLRRNLADDRYNQARTREVS------PRVPSKT 1064
            .::..|:|.|.   :..|:..||.|:..::..:.||.:: :.||.:..|      .|.|:|:
 Worm  1050 REEASEKRTRKEAEKKAEKEKEKAEKAAKEAAKELAREK-SPARAKSPSILTRLRDRSPAKS 1110

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cep135NP_001189108.1 Smc <203..963 CDD:224117 174/859 (20%)
DUF342 <302..421 CDD:302792 30/150 (20%)
tag-278NP_508635.2 SMC_prok_B 191..1016 CDD:274008 178/871 (20%)
DUF342 <205..299 CDD:302792 18/92 (20%)
SPFH_like <531..726 CDD:302763 43/207 (21%)
Bacillus_HBL <695..755 CDD:283454 16/60 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 117 1.000 Inparanoid score I3372
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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