DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cep135 and tsga10

DIOPT Version :9

Sequence 1:NP_001189108.1 Gene:Cep135 / 39647 FlyBaseID:FBgn0036480 Length:1065 Species:Drosophila melanogaster
Sequence 2:NP_001120166.1 Gene:tsga10 / 100145206 XenbaseID:XB-GENE-968206 Length:916 Species:Xenopus tropicalis


Alignment Length:963 Identity:226/963 - (23%)
Similarity:406/963 - (42%) Gaps:153/963 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   181 KCNAGVFQKTTTTTK-DGVTVTQTSGQEELDKMQNDLTAAGEQLEFFKRKVEARNREIRRLNDML 244
            |.:||..:.|....| |.:..|....::.::::......|..|::...||.|....|:..: |.|
 Frog     4 KNHAGHRRITELQIKIDELQKTNRGLEKHIEQLHESKEVASNQVDILTRKNEQLCEELTEI-DKL 67

  Fly   245 AGGRPLAALAKDCCYKDVGALSQDIDLLQREKSDLMMQVREFQDKMHDAMQRALSSEEDKIKLQT 309
            |     ..|.||        ..|.:|:.::|..|...::|:.|..:.: ::..:|:......|..
 Frog    68 A-----EQLEKD--------KEQLLDVAEKELEDAKNEIRQHQRTIEN-LEHTISNLTSDASLTK 118

  Fly   310 QLEELKEAALQVEQQANAEIDAKESELRQLQLELKKKGKDH-----------RLTGGFASNQSDK 363
            :..|..|.||:.:|..|..::....:|:..|..|:||.:.|           ..:...|.::.|.
 Frog   119 EQLEHAEVALKEKQDENRTLNVLVDQLQDDQNRLRKKIEKHERSEKNTVLACEKSNAMAPSRLDS 183

  Fly   364 --HNLNERLNLLTRREEELQAT--NEKHKKKIQKMQAKILELQKELKDQNKHSNVTLDEEKIRLS 424
              .:|.|..:...|..|.|:.|  .:....|......::|:|:.|||               :..
 Frog   184 FIKSLEEERDHYKREAENLRKTLRRQSLSPKRANTNTQLLQLESELK---------------KTL 233

  Fly   425 SERDFFQKEYLRLMSKTGSESEIAFLHAQIK--SKDEELKALRSELFHGGKQQFSPQKSVQYETL 487
            .|||    |...::.|  .|..:|.:.|.:|  :.|.:    ::.:.:...||...|...::...
 Frog   234 RERD----ELQTMLEK--YERHMAEIQANVKVLTSDRD----KANMLYDRAQQEITQLRREFLRS 288

  Fly   488 PPPTASSITSTVTSNTSDCVQAAIARVERERDCARTELERVRCERDTLREKQLSTVQLHADELQA 552
            |....||:|:          ||.:.|||.|||.|.::|.|:..|||:|||:...:.:....:...
 Frog   289 PKTPKSSVTA----------QAILQRVENERDIATSDLRRMTTERDSLRERLKISQENAISDRAH 343

  Fly   553 LRLRNEELNDRLRQMERDNRELNSARLPTETNLVLLKEDLLQMRQRVASMQTEIDQLKTENDQIT 617
            |..|.||....:|.||.::.||.|.....:..|..::.:|..:..|....:.|:.:.|.|.:.:.
 Frog   344 LEQRIEEYQSTIRIMENEHAELKSKLSLMKETLASVENELKILTSRTIDTEGELSRQKAECESLR 408

  Fly   618 MLNDQNERIIADYQSKLLVAERQRQSADVRASTLDSSRESNRSEVTQLRMDLGALRQTYISLEHE 682
            :||.:.|..:.:.|.:|.....:.|.|..:...|:.......|....||.::..|:.|...||.|
 Frog   409 LLNGETEHSLEETQRRLSAKNSELQIAQEKLIRLEEKLAEQSSHCFNLREEISFLKGTITELEKE 473

  Fly   683 KDTLLHQLDTKTERVYKLEYELKDCKEKRNALEQNVKDLEDQLRKLANRNRQRDSELTETSTESK 747
            ||:|:..:|.|||.:..||       :..:..:..:|.|.|.|.::.:..||....|:....|..
 Frog   474 KDSLIFSVDKKTENISTLE-------DSISVKDSTIKGLRDALSEIESSARQSAKTLSSHEQEIS 531

  Fly   748 TLRQQIVAL-----KASRD--EAIAENRRLMDKLSDAQVEARTLQKKLTDSELQVANMKQQLHKY 805
            .||:|:..:     |..||  .|..||..|.|:||.:::..:||..||.||:.:..::|.:|...
 Frog   532 RLRRQLDDMSDELTKTGRDRESAFKENSSLHDQLSKSKLNIQTLNSKLKDSQNEHEDIKLKLQSA 596

  Fly   806 VQEVKKAEDLLIQKVSSKFKEKERDDMLDQYHCLTQGQATLEGNNQSLECEAVEFRRQICELECE 870
            ..|:.:.:.|      :..||||..|:|:.|...:....:.|.....:|.|:...:..:...|.|
 Frog   597 KAEIVRLDSL------NNSKEKEYRDLLENYRRASAQSESWENKFHQMESESSSAKLDLMGKESE 655

  Fly   871 VHSLKEQLQLRQCALHDMEVQLTAARA----------SVRCLERELENARDDIRVQKV----DLE 921
            ...|||:::..:   .::|..:|:.::          ||..:|.||..|    :.:||    ||.
 Frog   656 CRLLKERVESLE---KEIEQYITSEQSHKSQMSNLAKSVTRVEEELRQA----KAEKVTILEDLA 713

  Fly   922 ARKELCDKLDVERSKLNAELNDVNEIRKKLEKQCEKLRDE---LQQSLAINQVTNETTDLML--- 980
            :.:|||.|||..:..:|..|...|:..::.:.:.|..|.:   |::.||..:::.:..:.:|   
 Frog   714 STRELCVKLDTSKEVINRHLCARNQDIERFQDELESSRSDIELLRKQLASERISVKNLEALLVSN 778

  Fly   981 -GRLHNDQQHQEDDD------------------------IRSKHEMDRLQRQLQQTLDQLQEERV 1020
             .:....|.|.:|.|                        .:.::::::.:.||:.|..||..|  
 Frog   779 QEKEFQSQVHAQDLDSELQLLGDKLALAETKLGTQSREAAQLRNKLNQQEAQLEMTKRQLSTE-- 841

  Fly  1021 RCRHHEELAEKWEQQVRD------LRRNLADDRYNQARTREVSPRV---PSKT 1064
              |...|||.|..::..|      ||.:|:..|.:...|...|.|.   |.:|
 Frog   842 --RFERELAAKELRRQTDYQATSTLRGSLSPSRLSPEYTFRPSVRTIQSPERT 892

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cep135NP_001189108.1 Smc <203..963 CDD:224117 190/800 (24%)
DUF342 <302..421 CDD:302792 27/133 (20%)
tsga10NP_001120166.1 Smc 11..671 CDD:224117 171/725 (24%)
SMC_prok_A 510..>856 CDD:274009 84/362 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 280 1.000 Domainoid score I1656
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 280 1.000 Inparanoid score I2836
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D139407at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm47883
Panther 1 1.100 - - O PTHR23159
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.070

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