DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ctps and AT4G20320

DIOPT Version :10

Sequence 1:NP_730023.1 Gene:Ctps / 39645 FlyBaseID:FBgn0266452 Length:627 Species:Drosophila melanogaster
Sequence 2:NP_001078411.1 Gene:AT4G20320 / 827780 AraportID:AT4G20320 Length:597 Species:Arabidopsis thaliana


Alignment Length:588 Identity:328/588 - (55%)
Similarity:412/588 - (70%) Gaps:9/588 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKYILVTGGVISGVGKGVIASSFGTLLKSCGLDVTSIKIDPYINIDAGTFSPYEHGEVYVLDDGA 65
            |||::|:|||:||:||||.|||.|.:|||||..||:||||||:||||||.||.|||||||||||.
plant     1 MKYVVVSGGVVSGLGKGVTASSIGLILKSCGFRVTAIKIDPYLNIDAGTMSPIEHGEVYVLDDGG 65

  Fly    66 EVDLDLGNYERFLDVTLHRDNNITTGKIYKLVIEKERTGEYLGKTVQVVPHITDAIQEWVERVAQ 130
            ||||||||||||:|:.|..:|||||||:||.|:||||.|:|||||||||||||||||:|:||.|:
plant    66 EVDLDLGNYERFMDIKLTSENNITTGKVYKHVLEKERRGDYLGKTVQVVPHITDAIQKWIERAAR 130

  Fly   131 TPVQGSSKP-QVCIVELGGTIGDIEGMPFVEAFRQFQFRVKRENFCLAHVSLVPLPKATGEPKTK 194
            .||.|.|.| .||::||||||||||.|||:||..||.:||..:||||.||||||:....||.|||
plant   131 IPVDGQSGPADVCVIELGGTIGDIESMPFIEALGQFSYRVGTDNFCLIHVSLVPVLNVVGEQKTK 195

  Fly   195 PTQSSVRELRGCGLSPDLIVCRSEKPIGLEVKEKISNFCHVGPDQVICIHDLNSIYHVPLLMEQN 259
            |||.|||:|||.||||:::.|||.||:...||.|:|.||||..:.|:.::|..:|:|:|||:::.
plant   196 PTQHSVRDLRGLGLSPNILACRSTKPLEDNVKAKLSQFCHVPMENVVTLYDCPNIWHIPLLLKEQ 260

  Fly   260 GVIEYLNERLQLNIDMSKRTKCLQQWRDLARRTETVRREVCIAVVGKYTKFTDSYASVVKALQHA 324
            ...|.:..  .||::...:...|::|..:|:.|:.:...|.||||||||:..|||.|:.|||.||
plant   261 KAHEAIFR--VLNLEGVAKEPALEEWSLMAKMTDKLHVPVRIAVVGKYTELLDSYLSIHKALLHA 323

  Fly   325 ALAVNRKLELVFIESCLLEEETLHSEPSKYHKEWQKLCDSHGILVPGGFGSRGMEGKIRACQWAR 389
            ::|..:||.:.:|.:..||:......|..|...|:.|..:.|:||||||||||:|||:.|.::||
plant   324 SVARRKKLIIDWISASDLEQGAKKENPDAYKAAWKLLKGADGVLVPGGFGSRGVEGKMLAAKYAR 388

  Fly   390 ENQKPLLGICLGLQAAVIEFARNKLGLKDANTTEIDPNTANALVIDMPEHHTGQLGGTMRLGKRI 454
            ||:.|.||||||:|.||||:||..|||.|||:||:||||.|..||.|||.....:|||||||.|.
plant   389 ENRIPYLGICLGMQLAVIEYARTILGLADANSTELDPNTKNPCVIFMPEGSKTHMGGTMRLGSRR 453

  Fly   455 TVFSDGPSVIRQLYGNPKSVQERHRHRYEVNPKYVHLLEEQGMRFVGTDVDKTRMEIIELSGHPY 519
            |.|....|...:||||...|.|||||||||||..|...|..|:.|.|.|....|||||||..||:
plant   454 TYFHSKDSKSARLYGNKSFVDERHRHRYEVNPAMVPRFESSGLTFTGKDETGQRMEIIELPNHPF 518

  Fly   520 FVATQYHPEYLSRPLKPSPPFLGLILASVDRLNQYIQRGCR--LSPRQLSDASSDEEDSVVGLAG 582
            :|..|:||||.|||.||||.|||||.|:...|:..:.:..:  :.||.|.:...:.    |...|
plant   519 YVGAQFHPEYKSRPGKPSPLFLGLIGAASGELDTVLLQSYQETVVPRSLPNGKLER----VYWKG 579

  Fly   583 ATK 585
            |.|
plant   580 AAK 582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CtpsNP_730023.1 PLN02327 1..556 CDD:215186 321/555 (58%)
AT4G20320NP_001078411.1 PLN02327 1..557 CDD:215186 321/557 (58%)

Return to query results.
Submit another query.