DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CTPsyn and emb2742

DIOPT Version :9

Sequence 1:NP_001287067.1 Gene:CTPsyn / 39645 FlyBaseID:FBgn0266452 Length:627 Species:Drosophila melanogaster
Sequence 2:NP_187873.1 Gene:emb2742 / 820447 AraportID:AT3G12670 Length:591 Species:Arabidopsis thaliana


Alignment Length:609 Identity:328/609 - (53%)
Similarity:412/609 - (67%) Gaps:40/609 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKYILVTGGVISGVGKGVIASSFGTLLKSCGLDVTSIKIDPYINIDAGTFSPYEHGEVYVLDDGA 65
            |||:||||||:||:||||.|||.|.||::|||.|||||||||:|.||||.||:|||||:|||||.
plant     1 MKYVLVTGGVVSGLGKGVTASSIGLLLQACGLRVTSIKIDPYLNTDAGTMSPFEHGEVFVLDDGG 65

  Fly    66 EVDLDLGNYERFLDVTLHRDNNITTGKIYKLVIEKERTGEYLGKTVQVVPHITDAIQEWVERVAQ 130
            ||||||||||||||.||.|||||||||||:.||:|||.|:|||:|||||||:|||||||:||||.
plant    66 EVDLDLGNYERFLDSTLTRDNNITTGKIYQSVIDKERKGDYLGRTVQVVPHVTDAIQEWIERVAN 130

  Fly   131 TPVQG-SSKPQVCIVELGGTIGDIEGMPFVEAFRQFQFRVKRENFCLAHVSLVPLPKATGEPKTK 194
            .||.| ...|.||::||||||||||.|||:||..||.::|...||||.||||||:....||.|||
plant   131 VPVDGKEGPPDVCVIELGGTIGDIESMPFIEALGQFSYKVGPGNFCLVHVSLVPVLSVVGEQKTK 195

  Fly   195 PTQSSVRELRGCGLSPDLIVCRSEKPIGLEVKEKISNFCHVGPDQVICIHDLNSIYHVPLLMEQN 259
            |||.|||.||..||:|:::.|||.|.:...||.|:|.||||....::.::|:.:|:|||||:.. 
plant   196 PTQHSVRGLRSLGLTPNILACRSTKALEENVKTKLSQFCHVPEVNIVTLYDVPNIWHVPLLLRD- 259

  Fly   260 GVIEYLNERLQLNIDMSKRTK-CLQQWRDLARRTETVRREVCIAVVGKYTKFTDSYASVVKALQH 323
               :..:|.:...:::|...| .|.:|....:..:|::..|.||:|||||..||||.||:|||.|
plant   260 ---QKAHEAILRELNLSNAIKPDLTEWTARTKIYDTLQDPVRIAMVGKYTGLTDSYLSVLKALLH 321

  Fly   324 AALAVNRKLELVFIESCLLEEETLHSEPSKYHKEWQKLCDSHGILVPGGFGSRGMEGKIRACQWA 388
            |::|.::||.:.::.:..|||.|....|..:...|..|..:.|||||||||.||::|||.|.::|
plant   322 ASVACHKKLVIEWVAASDLEEITAQETPDVHKAAWDLLKGADGILVPGGFGDRGVQGKILATKYA 386

  Fly   389 RENQKPLLGICLGLQAAVIEFARNKLGLKDANTTEIDPNTANALVIDMPEHHTGQLGGTMRLGKR 453
            ||||.|.||||||:|.||:||||:.||..|||:||.:|.|::..:|.|||..|..:|||||||.|
plant   387 RENQVPFLGICLGMQLAVVEFARSILGFHDANSTEFEPETSSPCIIFMPEGSTTHMGGTMRLGSR 451

  Fly   454 ITVFSDGPSVIRQLYGNPKSVQERHRHRYEVNPKYVHLLEEQGMRFVGTDVDKTRMEIIELSGHP 518
            .|.|........:||||.|.|.|||||||||||..:..:|:.|:.|||.|....||||:||..||
plant   452 KTYFQVADCKSAKLYGNAKFVDERHRHRYEVNPDMISEIEKAGLSFVGKDETGRRMEIVELPSHP 516

  Fly   519 YFVATQYHPEYLSRPLKPSPPFLGLILASVDRLNQYIQRGCRLSPRQLSDASSDEEDSVVGLAGA 583
            |||..|:|||:.|||.|||..|||||.|:         .||.              :||:...| 
plant   517 YFVGAQFHPEFKSRPGKPSALFLGLIAAA---------SGCL--------------ESVLQTGG- 557

  Fly   584 TKSLSSLKIPITPTNGISKSCNGS 607
                   |:.|...||::   |||
plant   558 -------KVNIVSKNGVA---NGS 571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CTPsynNP_001287067.1 PLN02327 1..556 CDD:215186 316/556 (57%)
CTP_synth_N 2..271 CDD:283956 173/269 (64%)
GATase1_CTP_Synthase 299..544 CDD:153217 134/244 (55%)
emb2742NP_187873.1 PLN02327 1..555 CDD:215186 320/580 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 368 1.000 Domainoid score I181
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H20446
Inparanoid 1 1.050 638 1.000 Inparanoid score I187
OMA 1 1.010 - - QHG60688
OrthoDB 1 1.010 - - D810128at2759
OrthoFinder 1 1.000 - - FOG0001109
OrthoInspector 1 1.000 - - otm2421
orthoMCL 1 0.900 - - OOG6_100470
Panther 1 1.100 - - O PTHR11550
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X676
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1312.980

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