DRSC/TRiP Functional Genomics Resources

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Protein Alignment sstn and Msn

DIOPT Version :9

Sequence 1:NP_648745.1 Gene:sstn / 39643 FlyBaseID:FBgn0036476 Length:635 Species:Drosophila melanogaster
Sequence 2:NP_110490.2 Gene:Msn / 81521 RGDID:621260 Length:577 Species:Rattus norvegicus


Alignment Length:318 Identity:61/318 - (19%)
Similarity:127/318 - (39%) Gaps:75/318 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 QIQKQETAIINGNYE---------HMTVNEFFVQLAQQYKHEQQLQALARENSSILRRKQSTTSR 138
            :|.|:..|:..||:|         .:.|.:...| |::.||::|::....||.   ::|:....:
  Rat   275 RINKRILALCMGNHELYMRRRKPDTIEVQQMKAQ-AREEKHQKQMERALLENE---KKKRELAEK 335

  Fly   139 ESRDSQMTINNNNRQSETLSNRSSEYDNYQPSSSAGAGDMLVIGVAQQQAQQQPPLVKSAL---- 199
            |....:       |:.|.|..:..:.:.....             |||:.::|   .:.||    
  Rat   336 EKEKIE-------REKEELMEKLKQIEEQTKK-------------AQQELEEQ---TRRALELEQ 377

  Fly   200 -KKRPTPTPSQMQYMRQQHQQ--QAHLAMNMNYQRSQPDVISMYSANSSNVATL------RQPPQ 255
             :||......::...||:.::  :|.|..:.:.:::|..:.|..:..::.::.|      ::...
  Rat   378 ERKRAQSEAEKLAKERQEAEEAKEALLQASRDQKKTQEQLASEMAELTARISQLEMARKKKESEA 442

  Fly   256 VAPQQQPIIVQCDKYYLSPTHQSYNEGGFIKSSQNIKKYVSP--MASPSNISYEQQQQRNPLHHQ 318
            ...||:..:||.|               ..|:...:|..:|.  :|.|:...:::|.: |.....
  Rat   443 EEWQQKAQMVQED---------------LEKTRAELKTAMSTPHVAEPAENEHDEQDE-NGAEAS 491

  Fly   319 RQL--DAISLAPSYVSVDMEAAQHQQQYRWRSQSHIAPLTPPQLGI-IEVKSHSSDML 373
            .:|  ||::...|......||.:::     |.|.|:..||...... .|.|..::||:
  Rat   492 AELRADAMAKDRSEEERTTEAEKNE-----RVQKHLKALTSELANARDESKKTTNDMI 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sstnNP_648745.1 None
MsnNP_110490.2 B41 7..206 CDD:214604
[IL]-x-C-x-x-[DE] motif. /evidence=ECO:0000250|UniProtKB:P26038 115..120
FERM_C_ERM 200..296 CDD:270015 6/20 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 322..342 4/29 (14%)
ERM 347..577 CDD:395622 43/235 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 358..453 17/110 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 468..549 20/83 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3529
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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