DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sstn and ccdc120b

DIOPT Version :9

Sequence 1:NP_648745.1 Gene:sstn / 39643 FlyBaseID:FBgn0036476 Length:635 Species:Drosophila melanogaster
Sequence 2:NP_001070919.2 Gene:ccdc120b / 768286 ZFINID:ZDB-GENE-061027-93 Length:615 Species:Danio rerio


Alignment Length:625 Identity:121/625 - (19%)
Similarity:219/625 - (35%) Gaps:177/625 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 DPKVRKE---NLEARKQALEQRLSEKSWLLQQIQKQETAIINGNYEHMTVNEF----FVQLA--- 109
            |.|::.|   .|:.|||:|:..|:.:...|:|:...|..:.........:.|.    |||..   
Zfish    23 DSKLQAERVSELQERKQSLQSLLNSRLGELRQVCLLEAELTGKLPRDFPLEEGERPPFVQRRSGL 87

  Fly   110 ---------QQYKHEQQLQALARENSSILRRKQSTTSRESRDSQMTINNNNRQSETLSNRSS--- 162
                     ......:|::||.   |..||| ...:.:.:..|:.|::......||:.:.||   
Zfish    88 PPYVTSKGDDDAGQRRQMKALF---SGALRR-SIDSDKNALHSKRTVHRGCHTEETVKSESSSMS 148

  Fly   163 ---EYDNYQPSSSAGAGDMLVIGVAQQQAQQQPPLVKSALKKR--PTPTPSQMQYMRQQHQQQAH 222
               .:||...|.|.         ..:.::...|.|..|:...|  ...:|.::.|..:..:..|.
Zfish   149 DSTSHDNEDSSPSV---------APEHRSLSHPRLAPSSPDSRLCRKLSPVEIYYEMRTRRNSAS 204

  Fly   223 LAMNMNY--------------------QRSQPDVISMYSANSSNVATLRQ---PPQVAPQQQPII 264
            .:::.::                    .|:.|..:.:....|..:| |:|   .|.| ||..|:.
Zfish   205 SSVSPSHSLPRSASNVEGRSVPATPLLSRTAPISVHVRPEVSGGIA-LKQWCGSPDV-PQFVPLA 267

  Fly   265 V---------QC----------------DKYYL----SPTHQSYNEGGFIKSSQNI---KKYVSP 297
            .         .|                |:..|    .|.:...|..|..|||:::   |.....
Zfish   268 SLEGSSSERRSCPYSSRARRSNSSEALLDRSSLPEPAPPRNGMPNRAGPYKSSESLTDGKLRQIY 332

  Fly   298 MASPSN--ISYEQQ-QQRNPLHHQRQLDAISLAPSYVSVDMEAAQHQQQYRWRSQSHIAPLTPPQ 359
            ..||..  :.::.| :.|:.|..|      |....|..:.|:....:||.|        |:..||
Zfish   333 QGSPERQLMGFKDQGRMRSSLGGQ------SSGTGYNEILMDYIWGKQQKR--------PVQIPQ 383

  Fly   360 LGIIEVKSHSSDML--AVPMPPSRYPP------HDEISLSSSSTTI--------EKKPKPKQWLE 408
                   |.|:..:  ....|||..||      |.::.|:::.::.        |.:|:..:...
Zfish   384 -------SQSAGRIWPDFSTPPSGTPPHYNGFSHSQLHLATAPSSYSPMLLRGQEAEPRRVKVTR 441

  Fly   409 SSLDGPAVIRQMDSQ------PHSPAGSSNGSSNP---------GAAAMVSSKP-RAKLSSQSMS 457
            :...||.:..|...|      .:.|:.:|..||.|         ..||..|.:| :..|.:...|
Zfish   442 TKSCGPFIPLQQHPQDAVLFSAYDPSSASTTSSIPNLLPHHTELSTAASFSRRPAQFSLPTPEDS 506

  Fly   458 VAGRHYSMSNQRPTPNYPSASYAVNTSSKA-------------LLSQSTSY----LNAMEQTLGI 505
            ....|.:::.:.....|...:...:|::|.             |:.|..|.    |.::.:.:..
Zfish   507 TRSLHKALALEGLRDWYLRNALGYSTTAKGHDGLSMRHSHTHHLVHQPQSIAADPLYSVHRQIPQ 571

  Fly   506 SVSYPLEPLDIPALR-NLPPKP------SQMQQPTPPPRP 538
            |.|:...||...::. :|.|:|      :|.:..:.||.|
Zfish   572 SASFHGHPLHARSVELSLYPEPFPSEGTTQKESGSEPPSP 611

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sstnNP_648745.1 None
ccdc120bNP_001070919.2 DUF3338 12..>86 CDD:288652 16/62 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3529
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.