DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sstn and inavab

DIOPT Version :9

Sequence 1:NP_648745.1 Gene:sstn / 39643 FlyBaseID:FBgn0036476 Length:635 Species:Drosophila melanogaster
Sequence 2:NP_001073474.1 Gene:inavab / 563192 ZFINID:ZDB-GENE-061103-190 Length:612 Species:Danio rerio


Alignment Length:646 Identity:123/646 - (19%)
Similarity:202/646 - (31%) Gaps:225/646 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 HSSSSNNNKIEDDPKVRKENLEARKQALEQRLSEKSWLLQQIQKQ--ETAIINGNYEHMTVNEFF 105
            ||...:...:..|.|.....::.::|:||.||   ...|.:::|.  ..|.:.|:          
Zfish    17 HSGPDSPTTMMKDVKTHTRVMKLKQQSLEDRL---KMCLVELKKLCIREAELTGH---------- 68

  Fly   106 VQLAQQYKHEQQLQALARENSSILRRKQSTTSRESRDSQMTINNNNRQSETLSNRSSEYDNYQPS 170
              |:..|      ..|..|....:||:.....:....|.:....|:..|...::.:.:...|   
Zfish    69 --LSSVY------PLLPGEKPPQIRRRIGAAFKLDEPSILHRTENSALSSVEADLALQQQIY--- 122

  Fly   171 SSAGAGDMLVIGVAQQQAQQQPPLVKSALKKRPTPTPSQMQYMRQQHQ----QQAHLAMNMNYQR 231
                        ||.|:..|:..|.|...:.|      ..||.|::.:    |:|...:.:.:.|
Zfish   123 ------------VAAQRLCQEEHLSKGVKRSR------LQQYQREERKLKDLQEAVFRLRLEHGR 169

  Fly   232 S--QPDVISMYSANS----SNVATLRQ---------------------PP----QVAPQQ----- 260
            |  :|.:|:...|:.    |:.|.|.:                     ||    .|||..     
Zfish   170 SSPRPGIITQRGASDDSSLSDSAVLEEDELSSQLSSEPPSAPAVDFYPPPIVISHVAPHAPVGPS 234

  Fly   261 ----QPIIVQCDKYYLSPTH--QS------------YNEGGFIKSSQNIKKYVSPMASPSNISYE 307
                ||:..|.....|...|  ||            :.|....:..|.:|:..|..:|||..:  
Zfish   235 YRPLQPLSYQTPPQSLESLHTCQSPENDPAPIQNSPWTESSLDQPYQKMKRSPSVKSSPSTPT-- 297

  Fly   308 QQQQRNPLHHQRQLDAISLAPSYVSVDMEAAQHQQQYRWRSQSHIAPLTPPQLGIIEVKSHSSDM 372
                         |.:|.:..:...:.::...|....  .:||..||.||      |:.......
Zfish   298 -------------LPSIEVCLADAGIPLQIPTHAALK--HTQSCSAPSTP------EMHLRRRQS 341

  Fly   373 LAVPM-PPSRYPPH-------------DEISLSSSS-TTIEKKPKPKQWLESSLDGPAVIRQMDS 422
            |.:|: .|:.|.|.             .|.::|||. :::........:..||.|        .:
Zfish   342 LRLPITEPNHYEPERDRGHLKGPRRRLTEFAVSSSEYSSMRLNVGNPVYYSSSED--------SN 398

  Fly   423 QPHS--PAGSSNGSSNPGAAAMVSSKPRAKLSSQSMSVAGRHYS--MSNQRPTPNYPSASYAVNT 483
            ..||  ...||....:||           :|.....|..|..|:  ..||.|....|:..|. ||
Zfish   399 SEHSFQSYASSPCQEHPG-----------ELPWTHQSQYGYQYASLADNQVPQRCSPTHFYK-NT 451

  Fly   484 SSKALLSQSTSYL-----NAMEQTLGIS--------------VSYPLEPLD-------------- 515
            ..::..|.:..|:     :|:|...|.|              ..|..|.|.              
Zfish   452 QYQSSPSFTRGYIEDGWGHALEMDSGRSYVNHQAPVYSSNGHYEYYCEALPSQQRSCRLLPAHVK 516

  Fly   516 ---IPALRNLPPKPSQ---------------MQQPTPPPRPPPANQAHTQNQNLSHSGNGS 558
               .|:||..|..||:               .:....||||          |:|..:..|:
Zfish   517 LSRAPSLREYPHHPSRGLPRQVVSEELKSWHQRSQFRPPRP----------QSLDRNRQGA 567

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sstnNP_648745.1 None
inavabNP_001073474.1 DUF3338 8..136 CDD:288652 28/154 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3529
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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