DRSC/TRiP Functional Genomics Resources

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Protein Alignment sstn and Mer

DIOPT Version :10

Sequence 1:NP_648745.1 Gene:sstn / 39643 FlyBaseID:FBgn0036476 Length:635 Species:Drosophila melanogaster
Sequence 2:NP_523413.1 Gene:Mer / 32979 FlyBaseID:FBgn0086384 Length:635 Species:Drosophila melanogaster


Alignment Length:337 Identity:66/337 - (19%)
Similarity:129/337 - (38%) Gaps:72/337 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 KIEDDPKVRKENLEARKQALEQRLSEKS------------WLLQQIQKQETAIINGN------YE 97
            |.:...:.::..:|.:|...|::|.||:            .|..:::....|:....      :|
  Fly   316 KAQAKEEKQRRQIERKKFIREKKLREKAEHERYELEKSMEHLQNEMRMANDALRRSEETKELYFE 380

  Fly    98 HMTVNEFFVQL----AQQYKHEQQLQALARENSSILRRKQSTTSRESRDS-----QMTINNNNRQ 153
            ...|||..:||    |..:|.|..   ..||....:.|::....::.||:     |:|:.|:.|:
  Fly   381 KSRVNEEQMQLTECKANHFKTEMD---RLRERQMKIEREKHDLEKKIRDADFYVHQLTVENDKRE 442

  Fly   154 SETLSNRSSEYDNYQPSSSAGAGDMLVIGVAQQQAQQQPPLVKSALKKRPTPTPSQMQYMRQQHQ 218
            :||...|.               :::...:|:::|..:  |::.....|.:.|.|.:......| 
  Fly   443 AETEKLRK---------------ELICAKMAEREATAR--LLEFLNSGRKSSTDSLLTASSVSH- 489

  Fly   219 QQAHLAMNMNYQRSQPDVISMYSANSSNVATLRQPPQVAPQQQPIIVQCDKYYLSPTHQSYNEGG 283
             .|:.|.:| ...|.|.:|:..|.|....|   ...::.......:||.|.  .|.....:....
  Fly   490 -AANTASSM-AAISTPSLITSSSTNDLETA---GGAELTTHSSHYLVQGDN--SSGISDDFEPKE 547

  Fly   284 FIKSSQNIKKYVSPMASPSNISYEQQQQRNPLHHQRQLDAISLAPSYVSVDMEAAQHQQQYRWRS 348
            ||.:...:::..:.| ..:::.|    .||....|.||..:.         .|.|.|:.:   .:
  Fly   548 FILTDNEMEQITNEM-ERNHLDY----LRNSKQVQSQLQTLR---------SEIAPHKIE---EN 595

  Fly   349 QSHIAPLTPPQL 360
            ||::..|:..|:
  Fly   596 QSNLDILSEAQI 607

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sstnNP_648745.1 None
MerNP_523413.1 B41 14..216 CDD:214604
FERM_C_ERM 210..306 CDD:270015
ERM_helical 340..459 CDD:466641 25/136 (18%)
ERM_C 559..635 CDD:459932 14/66 (21%)
Blue background indicates that the domain is not in the aligned region.

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