DRSC/TRiP Functional Genomics Resources

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Protein Alignment sstn and Frmd4b

DIOPT Version :9

Sequence 1:NP_648745.1 Gene:sstn / 39643 FlyBaseID:FBgn0036476 Length:635 Species:Drosophila melanogaster
Sequence 2:NP_001333566.1 Gene:Frmd4b / 232288 MGIID:2141794 Length:1035 Species:Mus musculus


Alignment Length:557 Identity:105/557 - (18%)
Similarity:172/557 - (30%) Gaps:224/557 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 KIEDDPKVRKENLEARKQALEQRLSEKSWLLQQIQKQETAIINGNYEHMTVNEFFVQLAQQYKHE 115
            |:..:|.:.|...:.|||.....:..    ||:|:.             ::||:.::..::...:
Mouse   519 KLASEPDLCKTVKKKRKQDYTDAVKR----LQEIEN-------------SINEYRIRCGKKPSQK 566

  Fly   116 QQL----QALARENSSILRRKQSTTSRESRDS-------------------------------QM 145
            ..:    ..:..|:||:   ..:||..:..||                               :.
Mouse   567 AAVVPPEDIIPSESSSL---SDTTTYDDPNDSFTLAGQRPSSVPHSPRILPPKSLGIERIHFRKS 628

  Fly   146 TINN---NNRQS-ETLSNRSSEYDNYQPSSSAGAGDMLVIGVAQQQAQQQPPLVKSALKKRPTPT 206
            :||.   :.|.| |.||..||.|...:.....|           :.....|.|.::|........
Mouse   629 SINEQFMDTRHSREMLSTHSSPYKTLERRPQGG-----------RSMPTTPVLTRNAYSSSHLEP 682

  Fly   207 PSQMQYMRQQH---QQQAHLAMNMN----------YQRSQPDVI----SMYSANSSN----VATL 250
            .|..|:.||:.   :.|:||...|:          .|||....|    |.|::.||:    |...
Mouse   683 DSSSQHCRQRSGSLESQSHLLSEMDSDKPFFTLSKSQRSSSTEILDDGSSYTSQSSSEYYCVTPA 747

  Fly   251 RQP------------------------------PQVAPQQQPI---------------------- 263
            ..|                              |.:| |:.|:                      
Mouse   748 ASPYYTTQTLDTRARGRRRSKKHSVSTSNSGSMPNLA-QKDPLRNGVYSKGQDPPPSGYYIAGYP 811

  Fly   264 -IVQCDKYYLSPTHQSYNEGGFIKSSQNIKKY-VSP-MASPSNISYEQQQQRNPLHHQRQLD--- 322
             ..:||.||         .||::..:....:| |:| ..|.::..|::|:..:...|:.::|   
Mouse   812 PYAECDLYY---------SGGYVYENDTEGQYSVNPSYRSSAHYGYDRQRDYSRSFHEDEVDRVP 867

  Fly   323 ----AISLAPSYVSVDME----------AAQH-----QQQYRWRSQSHIAPLTPPQLGIIEVKSH 368
                |....|...:|..|          .|:|     |:....:.|.| :|.|          |.
Mouse   868 HNPYATLRLPRKAAVKSEHITKNIHKALVAEHLRGWYQRASGQKDQGH-SPQT----------SF 921

  Fly   369 SSDM----------LAVPMPPSRYPPHDEISLSSSSTTIEKKPKPKQWLESSLDGPAVIRQMDSQ 423
            .||.          |.||..||        |.:||.:::........|......|   :.:.::.
Mouse   922 DSDRGSQRCLGFAGLQVPCSPS--------SRASSYSSVSSTNASGNWRTQLTIG---LSEYENP 975

  Fly   424 PHSPAGSSNGS-SNPGAAAMVSSKPRAKLSSQSMSVA 459
            .|||..|..|| .||             |||.|...|
Mouse   976 VHSPYTSYYGSIYNP-------------LSSPSRQYA 999

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sstnNP_648745.1 None
Frmd4bNP_001333566.1 Necessary for adherens junction and tight junction localization. /evidence=ECO:0000269|PubMed:20080746 542..972 86/492 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 563..615 7/54 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 631..699 17/78 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 713..738 6/24 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 754..798 4/44 (9%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 906..926 7/30 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 939..958 6/26 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 994..1035 2/6 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3529
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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