DRSC/TRiP Functional Genomics Resources

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Protein Alignment sstn and Msn

DIOPT Version :10

Sequence 1:NP_648745.1 Gene:sstn / 39643 FlyBaseID:FBgn0036476 Length:635 Species:Drosophila melanogaster
Sequence 2:NP_034963.2 Gene:Msn / 17698 MGIID:97167 Length:577 Species:Mus musculus


Alignment Length:318 Identity:62/318 - (19%)
Similarity:128/318 - (40%) Gaps:75/318 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 QIQKQETAIINGNYE---------HMTVNEFFVQLAQQYKHEQQLQALARENSSILRRKQSTTSR 138
            :|.|:..|:..||:|         .:.|.:...| |::.||::|::....||.   ::|:....:
Mouse   275 RINKRILALCMGNHELYMRRRKPDTIEVQQMKAQ-AREEKHQKQMERALLENE---KKKRELAEK 335

  Fly   139 ESRDSQMTINNNNRQSETLSNRSSEYDNYQPSSSAGAGDMLVIGVAQQQAQQQPPLVKSAL---- 199
            |....:       |:.|.|..:..:.:.....             |||:.::|   .:.||    
Mouse   336 EKEKIE-------REKEELMEKLKQIEEQTKK-------------AQQELEEQ---TRRALELEQ 377

  Fly   200 -KKRPTPTPSQMQYMRQQHQQ--QAHLAMNMNYQRSQPDVISMYSANSSNVATL------RQPPQ 255
             :||......::...||:.::  :|.|..:.:.:::|..:.|..:..::.::.|      ::...
Mouse   378 ERKRAQSEAEKLAKERQEAEEAKEALLQASRDQKKTQEQLASEMAELTARISQLEMARKKKESEA 442

  Fly   256 VAPQQQPIIVQCDKYYLSPTHQSYNEGGFIKSSQNIKKYVSP--MASPSNISYEQQQQRNPLHHQ 318
            |..||:..:||.|               ..|:...:|..:|.  :|.|:...:::|.: |.....
Mouse   443 VEWQQKAQMVQED---------------LEKTRAELKTAMSTPHVAEPAENEHDEQDE-NGAEAS 491

  Fly   319 RQL--DAISLAPSYVSVDMEAAQHQQQYRWRSQSHIAPLTPPQLGI-IEVKSHSSDML 373
            .:|  ||::...|......||.:::     |.|.|:..||...... .|.|..::||:
Mouse   492 AELRADAMAKDRSEEERTTEAEKNE-----RVQKHLKALTSELANARDESKKTANDMI 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sstnNP_648745.1 None
MsnNP_034963.2 B41 7..206 CDD:214604
[IL]-x-C-x-x-[DE] motif. /evidence=ECO:0000250|UniProtKB:P26038 115..120
FERM_C_ERM 200..296 CDD:270015 6/20 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 322..342 4/29 (14%)
ERM_helical 348..456 CDD:466641 21/138 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 358..419 13/76 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 468..518 11/55 (20%)
ERM_C 502..577 CDD:459932 12/48 (25%)
Blue background indicates that the domain is not in the aligned region.

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