DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Or71a and Or42b

DIOPT Version :10

Sequence 1:NP_524078.2 Gene:Or71a / 39641 FlyBaseID:FBgn0036474 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_523624.2 Gene:Or42b / 35516 FlyBaseID:FBgn0033043 Length:399 Species:Drosophila melanogaster


Alignment Length:408 Identity:90/408 - (22%)
Similarity:169/408 - (41%) Gaps:48/408 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDYDRIRPV------RFLTGVLKWWRL-----W-PRKESVSTPDWTNWQAYAL-----HVPFTFL 48
            |.::.|||.      |...|.:..:|.     | |.|:.|....:..|.....     ::|..||
  Fly     1 MVFELIRPAPLTEQKRSRDGCIYLYRAMKFIGWLPPKQGVLRYVYLTWTLMTFVWCTTYLPLGFL 65

  Fly    49 FVLLLWLEAIKSRDIQHTADVLLICLTTTALGGKVI----NIWKYAHVAQGILSEWSTWDLFELR 109
            .   .::..|||.........|.:|:.......||.    .:|:... |:.||      |..:||
  Fly    66 G---SYMTQIKSFSPGEFLTSLQVCINAYGSSVKVAITYSMLWRLIK-AKNIL------DQLDLR 120

  Fly   110 --SKQEVDMWRFEHRRFNRVFMFYCLCSAGVIPFIVIQPLFDIPNRLPFWMWTPF-DWQQPVL-F 170
              :.:|.:.......|.|..|:.:.....|......:..:  :..|.|:.::.|| ||....| .
  Fly   121 CTAMEEREKIHLVVARSNHAFLIFTFVYCGYAGSTYLSSV--LSGRPPWQLYNPFIDWHDGTLKL 183

  Fly   171 WYAFIYQATTIPIACACNVTMDAVNWYLMLHLSLCLRMLGQRLSKLQHDDK----DLREKFLELI 231
            |.|...:...:..|...:...|:......|.|...|.||.:|:.:|:.|:.    :..|:.::.:
  Fly   184 WVASTLEYMVMSGAVLQDQLSDSYPLIYTLILRAHLDMLRERIRRLRSDENLSEAESYEELVKCV 248

  Fly   232 HLHQRLKQQALSIEIFISKSTFTQILVSSLIICFTIYSMQMSPVLQDL-PGFAAMMQYLVAMIMQ 295
            ..|:.:.:....|:..|..:.|||.|:..|::.||:.::..   ..|: .|.|:.| :::.:::|
  Fly   249 MDHKLILRYCAIIKPVIQGTIFTQFLLIGLVLGFTLINVFF---FSDIWTGIASFM-FVITILLQ 309

  Fly   296 VMLPTIYG-NAVIDSANMLTDSMYNSDWPDMNCRMRRLVLMFMVYLNRPVTLKAGGFFHIGLPLF 359
            . .|..|. |.:::....||.:::.|:|.|.:.|.:..:|.|:..:.:|:...|||.|.|.:...
  Fly   310 T-FPFCYTCNLIMEDCESLTHAIFQSNWVDASRRYKTTLLYFLQNVQQPIVFIAGGIFQISMSSN 373

  Fly   360 TKTMNQAYSLLALLLNMN 377
            ......|:|::.:...||
  Fly   374 ISVAKFAFSVITITKQMN 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or71aNP_524078.2 7tm_6 68..367 CDD:251636 68/312 (22%)
Or42bNP_523624.2 7tm_6 76..381 CDD:251636 68/318 (21%)

Return to query results.
Submit another query.