DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or71a and Or42a

DIOPT Version :9

Sequence 1:NP_524078.2 Gene:Or71a / 39641 FlyBaseID:FBgn0036474 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_523622.2 Gene:Or42a / 35514 FlyBaseID:FBgn0033041 Length:406 Species:Drosophila melanogaster


Alignment Length:406 Identity:90/406 - (22%)
Similarity:166/406 - (40%) Gaps:65/406 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 PVR------------FLTGVLKWWRLWPRKESVSTPDWTNWQAYALHVPFTFLFVLLLWLEAIKS 60
            |||            ||.||    |..|.|..|:...|    ::||:...||...:     ...:
  Fly    18 PVRSRDATLYLLRCVFLMGV----RKPPAKFFVAYVLW----SFALNFCSTFYQPI-----GFLT 69

  Fly    61 RDIQHTADV--------LLICLTTTALGGKVINIW---KYAHVAQGILSEWSTWDLFELRSKQEV 114
            ..|.|.::.        |.:.....:...||:.:|   |....|..:|.|      .:.|.....
  Fly    70 GYISHLSEFSPGEFLTSLQVAFNAWSCSTKVLIVWALVKRFDEANNLLDE------MDRRITDPG 128

  Fly   115 DMWRFEHRRF---NRVFMFYCLCSAGVIPFIVIQPLFDIPNRLPFWMWTPF-DWQQPVLFWYAFI 175
            :..:. ||..   ||:|.|:............:..:|  ..|.|:..:.|| ||:...|.   ..
  Fly   129 ERLQI-HRAVSLSNRIFFFFMAVYMVYATNTFLSAIF--IGRPPYQNYYPFLDWRSSTLH---LA 187

  Fly   176 YQA----TTIPIACACNVTMDA--VNWYLML--HLSLCLRMLGQRLSKLQHDDKDLR-EKFLELI 231
            .||    ..:..||..:|.:|.  ||:.|:|  |:|:....| :||....::.::.: |:.::.|
  Fly   188 LQAGLEYFAMAGACFQDVCVDCYPVNFVLVLRAHMSIFAERL-RRLGTYPYESQEQKYERLVQCI 251

  Fly   232 HLHQRLKQQALSIEIFISKSTFTQILVSSLIICFTIYSMQMSPVLQDLPGFAAMMQYLVAMIMQV 296
            ..|:.:.:....:...||.:.|.|.||..|::.||:.::.:   ..:|....|.:.::.|::::.
  Fly   252 QDHKVILRFVDCLRPVISGTIFVQFLVVGLVLGFTLINIVL---FANLGSAIAALSFMAAVLLET 313

  Fly   297 MLPTIYGNAVIDSANMLTDSMYNSDWPDMNCRMRRLVLMFMVYLNRPVTLKAGGFFHIGLPLFTK 361
            ....|..|.:.:....|.|:::.|:|.|...|.::.::.|:..|.:|:|..|...|.|.:.....
  Fly   314 TPFCILCNYLTEDCYKLADALFQSNWIDEEKRYQKTLMYFLQKLQQPITFMAMNVFPISVGTNIS 378

  Fly   362 TMNQAYSLLALLLNMN 377
            ....::|:..|:..||
  Fly   379 VTKFSFSVFTLVKQMN 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or71aNP_524078.2 7tm_6 68..367 CDD:251636 68/322 (21%)
Or42aNP_523622.2 7tm_6 79..384 CDD:251636 68/320 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466073
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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