DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sytbeta and DOC2A

DIOPT Version :9

Sequence 1:NP_648734.1 Gene:Sytbeta / 39630 FlyBaseID:FBgn0261090 Length:602 Species:Drosophila melanogaster
Sequence 2:XP_024306240.1 Gene:DOC2A / 8448 HGNCID:2985 Length:467 Species:Homo sapiens


Alignment Length:534 Identity:124/534 - (23%)
Similarity:193/534 - (36%) Gaps:145/534 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 EEVAIAKECQPIQPASQLH-------GMHGGMGLNHHHMGTVSATGTDILRGPAEVFHSPLHLHH 171
            |.:||.....||:|..|:.       |..||.|                  |..|   :|.||..
Human    15 EHMAINVCPGPIRPIRQISDYFPRGPGPEGGGG------------------GGGE---APAHLVP 58

  Fly   172 QSRSFPPRLQRTPSISSQSSVDSAPSRHSGHRGSSPQIRTFGPDGRSSLPSEPGFPHHLARSPSP 236
            .:.:.|..|....:....:.|||..|..:...|:..                  |.....|:...
Human    59 LALAPPAALLGATTPEDGAEVDSYDSDDATALGTLE------------------FDLLYDRASCT 105

  Fly   237 MRTISLDARCGSPAH-SADPGDLRTPSPSQSSLASLAGGSGMGGSSAGKGVAGGRCLSPLLIPPR 300
            :....|.|:.|:|.| |..|..::.|..:.||..|.|                  |...|.:||.
Human   106 LHCSILRAKVGTPCHPSPGPVCVQPPEGAHSSFPSQA------------------CSFVLPLPPP 152

  Fly   301 SQPGVDPAMGPASPLGALQPDLYRMPDGPVYLTAPESSHAVGRLHLRVKYDYHLFDLTVHLIEAH 365
            |  |:  ..||     |||.....:|.....|..|                           ...
Human   153 S--GL--LQGP-----ALQEGWREVPGASSPLPCP---------------------------PLQ 181

  Fly   366 NLSPIEEGGFRDPYVRLMLQP-EVDSRKRQTHIHRGESNPYFDQHFKFP-VSRDQLQGKELILQV 428
            .|.|::..|..||||:|.|.| ...:.|.:|...|...||.:::...:. ::.|.:..|.|.:.|
Human   182 GLKPMDFNGLADPYVKLHLLPGACKANKLKTKTQRNTLNPVWNEDLTYSGITDDDITHKVLRIAV 246

  Fly   429 LDYDRYSHNDIIGEVRISVDGLDLSK--------------------SVEIWG------DLLRTKK 467
            .|.|:.|||:.|||:|:.:..|..|:                    |..:.|      :|.:.::
Human   247 CDEDKLSHNEFIGEIRVPLRRLKPSQKKHFNICLERQVPLASPSSMSAALRGISCYLKELEQAEQ 311

  Fly   468 PK---EDRPELLCSLNYLPQAERLTVVIMKARNLDTL-----QEPYVKIYLIQNGKRIKKKKTSI 524
            .:   |:|..:|.||:|..:...|.|.|::..:|..:     .:||||.||..:..:..|.||.:
Human   312 GQGLLEERGRILLSLSYSSRRRGLLVGILRCAHLAAMDVNGYSDPYVKTYLRPDVDKKSKHKTCV 376

  Fly   525 TKSDDPTNPIWNEAFTFNLQSNYLHNAAIEI----YVVGAGSEATEIGCCGLGPQESGTGCQHWH 585
            .|.  ..||.:||.|.:.::.:.|....:|:    |.:|..::.  ||...|||...|...:||.
Human   377 KKK--TLNPEFNEEFFYEIELSTLATKTLEVTVWDYDIGKSNDF--IGGVSLGPGARGEARKHWS 437

  Fly   586 DMINNARKPTAMWH 599
            |.:.........||
Human   438 DCLQQPDAALERWH 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytbetaNP_648734.1 C2 341..463 CDD:301316 32/149 (21%)
C2B_Synaptotagmin 473..601 CDD:175975 38/136 (28%)
DOC2AXP_024306240.1 C2A_Rabphilin_Doc2 90..280 CDD:176000 59/261 (23%)
C2B_Rabphilin_Doc2 321..453 CDD:176030 38/135 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.910

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