DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sytbeta and AT1G03370

DIOPT Version :10

Sequence 1:NP_648734.1 Gene:Sytbeta / 39630 FlyBaseID:FBgn0261090 Length:602 Species:Drosophila melanogaster
Sequence 2:NP_171836.3 Gene:AT1G03370 / 839519 AraportID:AT1G03370 Length:1020 Species:Arabidopsis thaliana


Alignment Length:182 Identity:53/182 - (29%)
Similarity:89/182 - (48%) Gaps:33/182 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   357 LTVHLIEAHNLSPIEEGGFRDPYVRLMLQPEVDSRKRQTHIHRGESNPYFDQHFKFPVSRDQLQG 421
            |.|.::||.||..::..||.||||||.|    ..::.:|.:.:...||.:.:.|.|.|  |.| .
plant     3 LQVRVVEARNLPAMDLNGFSDPYVRLQL----GKQRSRTKVVKKNLNPKWTEDFSFGV--DDL-N 60

  Fly   422 KELILQVLDYDRYSHNDIIGEVRISV----DGLDLSKSVEIWGDLLRTKK-PKEDRPELLCSLNY 481
            .||::.|||.|:|.::|.:|:||:||    |..:.|... :|..|...|| .|:|..|:|..:.:
plant    61 DELVVSVLDEDKYFNDDFVGQVRVSVSLVFDAENQSLGT-VWYPLNPKKKGSKKDCGEILLKICF 124

  Fly   482 LPQAERLTVVIMKARNLDTLQEPYVKIYLIQNGKRIKKKKTSITKSDDPTNP 533
               :::.:|       ||          |..:|.:....::...:.:.|.:|
plant   125 ---SQKNSV-------LD----------LTSSGDQTSASRSPDLRLESPIDP 156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytbetaNP_648734.1 PHA03307 39..>267 CDD:223039
C2 341..463 CDD:472691 39/109 (36%)
C2B_Synaptotagmin 473..601 CDD:175975 9/61 (15%)
AT1G03370NP_171836.3 C2 2..104 CDD:425499 39/108 (36%)
VASt 252..401 CDD:464975
C2 535..637 CDD:425499
PH-GRAM_C2-GRAM 699..812 CDD:270039
VASt 851..992 CDD:464975
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.