DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytbeta and AT5G48060

DIOPT Version :9

Sequence 1:NP_648734.1 Gene:Sytbeta / 39630 FlyBaseID:FBgn0261090 Length:602 Species:Drosophila melanogaster
Sequence 2:NP_199617.1 Gene:AT5G48060 / 834858 AraportID:AT5G48060 Length:1036 Species:Arabidopsis thaliana


Alignment Length:582 Identity:114/582 - (19%)
Similarity:186/582 - (31%) Gaps:250/582 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 SSTAGGNGVSVVHILPIGEGSTTP-PPQPMTPPPSASSVTSTTSGIGSVSAGSVSDSCDLPTD-- 112
            ||..|..|:. .:|....|..|.| |.:|.|.|..||            ::|:..|:.|..|:  
plant   119 SSVKGEIGLK-FYISSSEEDQTFPLPSKPYTSPTQAS------------ASGTEEDTADSETEDS 170

  Fly   113 ------SEEVAIA---KEC-------QPIQPASQLHGMHGGMGLNHHHMGTVSATGTDILRGPAE 161
                  :||..:|   .||       :..:|..:||..                          |
plant   171 LKSFASAEEEDLADSVSECVEGKKSEEVKEPVQKLHRQ--------------------------E 209

  Fly   162 VFHSPLHLHHQSRSFPPRLQRTPSISSQSSVDSAPSRHSGHRGSSPQIRTFGPDGRSSLPSEPGF 226
            ||..|..:  ||    .||:               ||.:.|....|..|     |.:.|  .|..
plant   210 VFARPAPM--QS----IRLR---------------SRENPHEAQKPMSR-----GANQL--HPQN 246

  Fly   227 PHHLAR------SPSPMRTISLDARCGSPAHSADPGDLRTPSPSQSSLASLAGGSGMGGSSAGKG 285
            |:||..      ....::.::||.           |: |.|:|                 :||:.
plant   247 PNHLQSYGDTDLDDFKVKDMNLDL-----------GE-RWPNP-----------------NAGER 282

  Fly   286 VAGGRCLSPLLIPPRSQPGVDPAMGPASPLGALQPDLYRMPDGPVYLTAPESSHAVGRLHLRVKY 350
            ..|                                                            .|
plant   283 FTG------------------------------------------------------------TY 287

  Fly   351 DY--HLFDLTVHLIEAHNLSPIEEGGFRDPYVRLMLQPEVDSRKRQTHI-HRGESNPYFDQHFKF 412
            |.  .:|.|.|.:::|..|.|....|..||||.:.|    .:.|.:|.| .|..:.|.::|.|.|
plant   288 DLVEQMFYLYVRVVKAKELPPGSITGGCDPYVEVKL----GNYKGRTKIFDRKTTIPEWNQVFAF 348

  Fly   413 PVSRDQLQGKELILQVLDYDRYSHNDIIGEVRISVDGLDLSK----------------SVEIW-- 459
              :::::|...|.:.|.|.:....:||:|:|     ..||::                .:|.|  
plant   349 --TKERIQSSVLEVFVKDKETLGRDDILGKV-----VFDLNEIPTRVPPNSPLAPQWYRLEDWRG 406

  Fly   460 -GDLLRTK---------KPKEDRPEL---------------LCSLNYL-PQAERLTVVIMKARNL 498
             |.::|.:         :..|..||.               :.|..|: |:...|.|.:::|:::
plant   407 EGKVVRGEIMLAVWMGTQADEAFPEAWHADSASVHGEGVFNIRSKVYVSPKLWYLRVNVIEAQDM 471

  Fly   499 -----DTLQEPYVKIYLIQNGKRIKKKKTSITKSDDPTNPIWNEAFTFNLQSNYLHNAAIEI 555
                 :.|.:.:||..:     .::..||||. |...|||:|.|...|.:...:.....|.:
plant   472 IPSDRNRLPDVFVKASV-----GMQTLKTSIC-SIKTTNPLWKEDLVFVVAEPFEEQLVISV 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytbetaNP_648734.1 C2 341..463 CDD:301316 35/143 (24%)
C2B_Synaptotagmin 473..601 CDD:175975 23/104 (22%)
AT5G48060NP_199617.1 C2A_MCTP_PRT_plant 6..133 CDD:175989 5/14 (36%)
C2B_MCTP_PRT_plant 295..423 CDD:176024 33/138 (24%)
C2C_MCTP_PRT_plant 460..613 CDD:175986 18/74 (24%)
C2D_MCTP_PRT_plant 626..753 CDD:176025
PRT_C 881..1036 CDD:285560
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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