DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Sytbeta and SYTD

DIOPT Version :9

Sequence 1:	NP_648734.1	Gene:	Sytbeta / 39630	FlyBaseID:	FBgn0261090	Length:	602	Species:	Drosophila melanogaster
Sequence 2:	NP_196671.2	Gene:	SYTD / 830978	AraportID:	AT5G11100	Length:	569	Species:	Arabidopsis thaliana

Alignment Length:	257	Identity:	60/257 - (23%)
Similarity:	111/257 - (43%)	Gaps:	66/257 - (25%)

- Green bases have known domain annotations that are detailed below.

  Fly   357 LTVHLIEAHNLSPIEEGGFRDPYVRLMLQPEVDSRKRQTHIHRGESNPYFDQHFKFPVSRDQLQG 421
            |.|.:::|.:|:..:..|..|||..:.::|..| |.::|.......||.:::||:|.|  :.:..
plant   266 LDVKVVQAKDLANKDMIGKSDPYAIVFIRPLPD-RTKKTKTISNSLNPIWNEHFEFIV--EDVST 327

  Fly   422 KELILQVLDYDRYSHNDIIGEVRISVDGLDLSKSVEIWGDLLR-------TKKPKEDRPELL-C- 477
            :.|.::|.|.:....:.:||..::.::.|...|..:||..|::       ||...:.:.||| |
plant   328 QHLTVRVFDDEGVGSSQLIGAAQVPLNELVPGKVKDIWLKLVKDLEIQRDTKNRGQVQLELLYCP 392

  Fly   478 ---------------SLNYL-----PQAER----------------------LTVVIMKARNLDT 500
                           ||..|     |::|.                      |:|.::.|.:|..
plant   393 LGKEGGLKNPFNPDYSLTILEKVLKPESEDSDATDMKKLVTSKKKDVIVRGVLSVTVVAAEDLPA 457

  Fly   501 LQ-----EPYVKIYLIQNGKRIKKKKTSITKSDDPTNPIWNEAFTFNLQSNYLHN-AAIEIY 556
            :.     :.:|.|.|   .|...|.||.:.  .|..||:||:.|.|.:: :.||: ..:|::
plant   458 VDFMGKADAFVVITL---KKSETKSKTRVV--PDSLNPVWNQTFDFVVE-DALHDLLTLEVW 513

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Sytbeta	NP_648734.1	C2	341..463	CDD:301316	27/105 (26%)
Sytbeta	NP_648734.1	C2B_Synaptotagmin	473..601	CDD:175975	30/134 (22%)
SYTD	NP_196671.2	SMP_LBD	69..251	CDD:293652
		C2	264..368	CDD:278593	27/104 (26%)
		C2	443..545	CDD:278593	21/77 (27%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910