DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytbeta and SYTC

DIOPT Version :10

Sequence 1:NP_648734.1 Gene:Sytbeta / 39630 FlyBaseID:FBgn0261090 Length:602 Species:Drosophila melanogaster
Sequence 2:NP_974729.1 Gene:SYTC / 830301 AraportID:AT5G04220 Length:540 Species:Arabidopsis thaliana


Alignment Length:360 Identity:90/360 - (25%)
Similarity:141/360 - (39%) Gaps:92/360 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   291 CLSPLLIPPRSQPGVD---PAMGPASPLGALQ--PDLYR------------MPDGPVYLTAP--E 336
            |...:::....:|.||   ..:|     |.|.  |.|||            |...|..|..|  :
plant   191 CFGMVVVSLMEKPHVDFGLKVLG-----GDLMSIPGLYRYVQETIKRQVSSMYHWPQVLEIPILD 250

  Fly   337 SSHA-----VGRLHLRVKYDYHLFDLTVHLIEAHNLSPIEEGGFRDPYVRLMLQPEVDSRKRQTH 396
            ||.|     ||.||             |.::.|.||...:..|..||||:|.|..|....|:.| 
plant   251 SSTASVKKPVGLLH-------------VSILRARNLLKKDLLGTSDPYVKLSLTGEKLPAKKTT- 301

  Fly   397 IHRGESNPYFDQHFKFPVSRDQLQGKELILQVLDYDRYSHNDIIGEVRISVDGLDLSKSVEIWGD 461
            |.:...||.:::|||..|.....|  .|.|:|.|:|:...:|.:|...|.:..::..:..|...|
plant   302 IKKRNLNPEWNEHFKLIVKDPNSQ--VLQLEVFDWDKVGGHDRLGMQMIPLQKINPGERKEFNLD 364

  Fly   462 LLRTKK------PKEDRPELLCSLNYLP-------------------------QAERLTVVIMKA 495
            |::...      .|:.|..|...|.|:|                         ||..|:|.:..|
plant   365 LIKNSNVVMDSGDKKKRGRLEVDLRYVPFREESIKRRKESREEKSSEDDDFLSQAGLLSVAVQSA 429

  Fly   496 RNLDTLQE---PYVKIYLIQNGKRIKKKKTSITKSDDPTNPIWNEAFTFNLQSNYLHNAAIEIYV 557
            ::::..::   ||..:..     |.:||||.:.|.  ..:|.|||.|.|.|:...: ..:|.:.|
plant   430 KDVEGKKKHSNPYAVVLF-----RGEKKKTKMLKK--TRDPRWNEEFQFTLEEPPV-KESIRVEV 486

  Fly   558 VGAGSEATEIGCCGLGPQESGTGCQHWHDMINNAR 592
            :..|:     |......:|.|....:..|:::|.|
plant   487 MSKGT-----GFHFRSKEELGHVDINLDDVVDNGR 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytbetaNP_648734.1 PHA03307 39..>267 CDD:223039
C2 341..463 CDD:472691 36/121 (30%)
C2B_Synaptotagmin 473..601 CDD:175975 33/148 (22%)
SYTCNP_974729.1 DUF456 <7..>30 CDD:461257
SMP_SYT 62..248 CDD:439233 14/61 (23%)
COG5038 67..>538 CDD:227371 90/360 (25%)
Blue background indicates that the domain is not in the aligned region.

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